Job Description P09147 Confidence 100.00% Date Thu Jan 5 11:01:57 GMT 2012 Rank 28 Aligned Residues 308 % Identity 17% Template c2b69A_ PDB info PDB header:lyase Chain: A: PDB Molecule:udp-glucuronate decarboxylase 1; PDBTitle: crystal structure of human udp-glucoronic acid decarboxylase Resolution 1.21 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	V	T	G	G	S	G	Y	I	G	S	H	T	C	V	Q	L	L	Q	N	G	H	D	V	I	I	L	D	N	L	C	N	S	K	R	S	V	L	P	V	I	E	R	L	G	G	K	H	P	T	F	V	E	G	D	I	R	N	E	A	L	M	T	E	I	L	H	D	H	A	I	D	T	V	I	H	F	A
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		R	I	L	I	T	G	G	A	G	F	V	G	S	H	L	T	D	K	L	X	X	D	G	H	E	V	T	V	V	D	N	F	F	T	G	R	K	R	N	V	E	H	.	.	.	.	.	.	.	W	I	G	H	E	N	F	E	L	I	N	H	D	V	V	E	P	L	Y	I	E	V	D	Q	I	Y	H	L	A	S	P
Template Known Secondary structure							T	T	T	S													T	T										S	S			G	G	G	T	G	G	.	.	.	.	.	.	.	G	T	T		T	T								T	T	S							S							S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	A	V	G	E	S	V	Q	K	P	L	E	Y	Y	D	N	N	V	N	G	T	L	R	L	I	S	A	M	R	A	A	N	V	K	N	F	I	F	S	S	S	A	T	V	Y	G	D	Q	P	K	I	P	Y	V	E	S	F	P	T	G	T	P	Q	S	P	Y	G	K	S	K	L	M	V	E	Q	I	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	P	P	N	Y	X	Y	N	P	I	K	T	L	K	T	N	T	I	G	T	L	N	X	L	G	L	A	K	R	V	G	A	R	L	L	L	A	S	T	S	E	V	Y	G	D	P	E	V	H	P	Q	S	E	D	Y	W	G	H	V	N	P	I	G	P	R	A	C	Y	D	E	G	K	R	V	A	E	T	X	C
Template Known Secondary structure			S					T	T																								T									G	G	G	G	B	S		S	S	S	S	B		T	T				B			S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Q	K	A	Q	P	D	W	S	I	A	L	L	R	Y	F	N	P	V	G	A	H	P	S	G	D	M	G	E	D	P	Q	G	I	P	N	N	L	M	P	Y	I	A	Q	V	A	V	G	R	R	D	S	L	A	I	F	G	N	D	Y	P	T	E	D	G	T	G	V	R	D	Y	I	H	V	M	D	L	A	D
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		Y	A	Y	X	K	Q	E	G	V	E	V	R	V	A	R	I	F	N	T	F	G	P	R	X	H	X	N	D	.	.	.	.	.	.	.	.	G	R	V	V	S	N	F	I	L	Q	A	L	Q	G	E	P	L	T	V	Y	.	.	.	.	.	.	.	G	S	G	S	Q	T	R	A	F	Q	Y	V	S	D	L	V	N
Template Known Secondary structure																							T	T			T	T		.	.	.	.	.	.	.	.														T							.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	V	V	A	M	E	K	L	A	N	K	P	G	V	H	I	Y	N	L	G	A	G	V	G	N	S	V	L	D	V	V	N	A	F	S	K	A	C	G	K	P	V	N	Y	H	F	A	P	R	R	E	G	D	L	P	A	Y	W	A	D	A	S	K	A	D	R	E	L	N	W	R	V	T	R	T	L	D	E	M
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		G	L	V	A	L	X	N	S	N	V	S	S	P	.	.	.	.	V	N	L	G	N	P	E	E	H	T	I	L	E	F	A	Q	L	I	K	N	L	V	G	S	G	S	E	I	Q	F	L	S	E	A	Q	D	D	P	Q	K	R	K	P	D	I	K	K	A	K	L	X	L	G	W	E	P	V	V	P	L	E	E	G
Template Known Secondary structure								T	S	S			S		.	.	.	.				S																			T												T	T							B															S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	D	T	W	H	W	Q	S	R	H	P	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	K	A	I	H	Y	F	R	K	E	L	E	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions