|   |
4 | . | . | . | . | . | 10 | . | . | . | . | |
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. | . | . | . | . | 20 | . | . | . | . | . | . | |
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. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
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|
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
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|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |
Query SS confidence |   |
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|
| . |
. |
. |
. |
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| . |
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. |
. |
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. |
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| . |
. |
. |
. |
. |
Query Sequence |   |
S | I | R | R | S | R | H | E | E | G | E | . |
. |
. |
. |
E | L | V | A | I | W | C | R | S | V | D | A | . |
. |
. |
. |
. |
. |
T | H | D | F | L | S | A | E | Y | R | T | E | L | E | D | L | V | R | S | F | L | P | E | A | P | L | W | V | A | V | N | E | R | D | Q | P | V | G | F | M | L | L | . |
. |
. |
. |
. |
Query Conservation |   |
  |
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|   |
|   |   |   |
|   |   | . | . | . | . |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   | . | . | . | . | . |
Alig confidence |   |
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| . | . | . | . |
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| . | . | . | . | . | . |
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| . | . | . | . | . |
Template Conservation |   |
  |
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|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | L | R | R | V | T | A | E | S | F | A | H | Y | R | H | G | L | A | Q | L | L | F | E | T | V | H | G | G | A | S | V | G | F | X | A | D | L | D | X | Q | Q | A | Y | A | W | C | D | G | L | K | A | D | I | A | A | G | S | L | L | L | W | V | V | A | E | D | D | N | V | L | A | S | A | Q | L | S | L | C | Q | K |
Template Known Secondary structure |   |
 |  |  |  |
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
|
|  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
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|
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
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. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
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|
. | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|
|
|  |  |  |  |  |  |  |
|  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
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|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  | . | . | . |
|
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|  |
Query SS confidence |   |
. |
. |
. |
. |
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| . |
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| . |
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Query Sequence |   |
. |
. |
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. |
S | G | Q | H | M | D | A | L | F | I | D | P | D | V | R | G | C | G | V | G | R | V | L | V | E | H | A | L | S | . |
. |
. |
. |
. |
M | A | P | E | L | T | T | N | V | N | E | Q | N | E | Q | A | V | G | F | Y | K | K | V | G | F | K | V | T | G | R | S | E | V | . |
. |
. |
D | D | L | G | K | P |
Query Conservation |   |
. | . | . | . |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   | . | . | . |   |   |   |
|   |   |
Alig confidence |   |
. | . | . | . |
|
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| . | . | . | . | . |
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| . |
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| . | . | . |
|
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   | . |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
P | N | G | L | N | R | A | E | V | Q | K | L | X | V | L | P | S | A | R | G | R | G | L | G | R | Q | L | X | D | E | V | E | Q | V | A | V | K | H | K | R | G | L | L | H | L | D | T | E | . |
A | G | S | V | A | E | A | F | Y | S | A | L | A | Y | T | R | V | G | E | L | P | G | Y | C | A | T | P | D | G | R | L |
Template Known Secondary structure |   |
T | T |
| T | T |  |  |  |  |  |  |  |  |  |
| G | G | G | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | . | T | T | S |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
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|
|
|
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|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
  |   |
137 | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
Y | P | L | L | N | L |
Query Conservation |   |
  |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
Template Sequence |   |
H | P | T | A | I | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . |
  |