|   |
3 | . | . | . | . | . | . | 10 | . | . | |
. | . | . | . | . | . | . | 20 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  | . |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
I | S | I | R | R | S | R | H | E | E | . |
G | E | E | L | V | A | I | W | . |
. |
. |
. |
. |
C | R | S | V | D | A | T | H | D | F | L | S | A | E | Y | R | T | E | L | E | D | L | V | R | S | F | L | P | E | A | P | L | W | V | A | V | N | E | . |
. |
R | D | Q | P | V | G | F | M | L | L | S | G | Q | . |
. |
. |
Query Conservation |   |
|   |
|
|   |
|   |   |   |
| . |   |   |   |
|   |   |
|   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |
|   |   |   |   |   |   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|   |
|
|
|
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | R | L | E | P | L | N | A | Q | K | H | G | D | E | L | F | A | A | S | S | V | E | D | A | E | Q | R | F | T | W | L | F | E | T | P | P | A | T | R | A | E | F | E | P | W | L | D | K | A | S | K | S | D | D | P | L | F | F | A | V | I | D | K | A | S | G | K | V | A | G | R | Q | A | L | M | R | I | D | P | A |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |  |  |  |  | T | T | T | S | S | S |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
  |   |
|
|
|
|
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
H | M | D | A | L | F | I | D | P | D | V | R | G | C | G | V | G | R | V | L | V | E | H | A | L | S | . |
. |
. |
. |
. |
. |
M | A | P | E | L | T | T | N | V | N | E | Q | N | E | Q | A | V | G | F | Y | K | K | V | G | F | K | V | T | G | . |
. |
R | S | E | V | D | D | L | G | K | P | Y | P | L |
Query Conservation |   |
. | . | . | . |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
| . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |
|
|   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
N | G | V | I | E | I | G | S | I | Y | W | G | P | L | I | S | R | R | P | A | A | T | E | A | Q | F | L | F | M | Q | Y | V | F | D | V | L | G | Y | R | R | Y | E | W | E | C | H | N | E | N | G | P | S | R | R | A | A | E | R | F | G | F | R | F | E | G | I | F | R | Q | H | M | V | V | K | G | R | N | R | D | T |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |
| T | T | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
  |
  |   |
140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
L | N | L | A | Y |
Query Conservation |   |
  |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
Template Sequence |   |
A | W | F | S | V |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
183 | . | . | . | . |
  |