Return to main results Retrieve Phyre Job Id

Job DescriptionP09163
Confidence99.66%DateThu Jan 5 11:02:07 GMT 2012
Rank61Aligned Residues120
% Identity19%Templatec2reeB_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:cura; PDBTitle: crystal structure of the loading gnatl domain of cura from lyngbya2 majuscula
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70
Predicted Secondary structure 
















............
Query SS confidence 



































































. . . . . . . . . . . .
Query Sequence  ISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLSG. . . . . . . . . . . .
Query Conservation 
 

 
   
   
  
                                          
 
      ............
Alig confidence 






































.......





















............
Template Conservation 
 

 
   

  
  
    
              
  .......               
                  
Template Sequence  YNLRHPKIEDLRDLIALETLCWSENLQVDNEEIYRRIFK. . . . . . . IPQGQFILELEDKIVGAIYSQRIDNPQLLDNKTC
Template Known Secondary structure 


GGGS
TTT


.......
GGG
TTS
GGGGTT

T
Template Predicted Secondary structure 











.......


















Template SS confidence 















































































   228.230.........240.........250.........260...... ...270.........280.........290.........300
 
   71........80.........90....... ..100.........110
Predicted Secondary structure  .............




......







.....................
Query SS confidence  . . . . . . . . . . . . .


























. . . . . .












. . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . QHMDALFIDPDVRGCGVGRVLVEHALS. . . . . . MAPELTTNVNEQN. . . . . . . . . . . . . . . . . . . . .
Query Conservation  .............  
  
 
 
  

 
 
  

     ......      
 
   
.....................
Alig confidence  .............


























......












.....................
Template Conservation                 
  
 
 
  

 


  

   
  
    
   
   

  
           
       
 
Template Sequence  TQVPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAVTLCRNYPDYSPMPMAEYIHQKNESGL
Template Known Secondary structure  TTGGGG

TT
S
TTSTTSSTTSTT



SSGGGGTTS
TT
B
TTS
Template Predicted Secondary structure 



































Template SS confidence 















































































   301........310.........320.........330.........340.........350.........360.........370.........380
 
   111........120.........
Predicted Secondary structure  ..


Query SS confidence  . .


















Query Sequence  . . EQAVGFYKKVGFKVTGRSE
Query Conservation  ..  
  

 
 

   
   
Alig confidence  ..


















Template Conservation    

 
 
    

       
Template Sequence  LVDPLLRFHQIHGAKIEKLLP
Template Known Secondary structure  BSSTT
T
Template Predicted Secondary structure 






Template SS confidence 




















   381........390.........400.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions