Return to main results Retrieve Phyre Job Id

Job DescriptionQ57154
Confidence35.78%DateThu Jan 5 12:37:14 GMT 2012
Rank41Aligned Residues40
% Identity23%Templated3bz6a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PSPTO2686-like
Resolution2.21

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230... ......240.........250....
Predicted Secondary structure 









....



Query SS confidence 


















. . . .




















Query Sequence  RDPAPISLARLRARLNLKS. . . . PVFSQNQTVRRAMEQLREIGY
Query Conservation    
 


  





 
 
....    

  







  


Alig confidence 


















....




















Template Conservation 

 







  







 


 
 
  
  


 
    
Template Sequence  PETYPLTLNALVIACNQKTSRDPVXNLTQGQVGQSLRALEGRGL
Template Known Secondary structure  GGG
ST
SSS
SS




TTS
Template Predicted Secondary structure 














Template SS confidence 











































   38.40.........50.........60.........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions