Job Description Q57154 Confidence 20.77% Date Thu Jan 5 12:37:14 GMT 2012 Rank 79 Aligned Residues 58 % Identity 22% Template d2oz6a1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 2.80

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		S	A	Q	A	L	Y	T	F	I	E	S	L	P	R	D	P	.	.	.	.	.	.	A	P	I	S	L	A	R	L	R	A	R	L	N	L	K	S	P	V	F	S	Q	N	Q	T	V	R	R	A	M	E	Q	L	R	E	I	G	Y	L	D	Y	T	E	I	Q	R	G	R	T	K	F	F	C
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																.	.	.	.	.	.																			.	.	.	.
Template Conservation																																							.	.	.	.	.	.																			.	.	.	.
Template Sequence		V	A	R	T	L	L	D	L	C	Q	Q	P	D	A	M	T	H	P	D	G	M	Q	I	K	I	T	R	Q	E	I	G	R	I	V	G	C	S	.	.	.	.	.	.	R	E	M	V	G	R	V	L	K	S	L	E	E	Q	G	L	V	H	.	.	.	.	V	K	G	K	T	M	V	V	F
Template Known Secondary structure										T	T	S	T	T					T	T																T	S		.	.	.	.	.	.														T	T	S			.	.	.	.			T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions