Job Description Q57154 Confidence 96.87% Date Thu Jan 5 12:37:14 GMT 2012 Rank 5 Aligned Residues 92 % Identity 14% Template d2nrac2 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Replication initiation protein Resolution 3.10

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.													.	.	.	.	.	.	240		.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																																.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		D	R	K	V	L	L	Q	L	K	A	I	N	A	L	K	R	R	E	S	A	Q	A	L	Y	T	F	I	E	S	L	.	.	.	.	.	P	R	D	P	A	P	I	S	L	A	R	L	R	A	R	L	N	L	K	S	.	.	.	.	.	.	.	.	.	.	.	.	P	V	F	S	Q	N	Q	.	T	V	R	R	A
Query Conservation																																.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence																			.													.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																			.
Template Sequence		N	K	F	T	T	Q	L	L	T	A	S	L	R	L	S	S	Q	.	Y	S	S	S	L	Y	Q	L	I	R	K	H	Y	S	N	F	K	K	K	N	Y	F	I	I	S	V	D	E	L	K	E	E	L	I	A	Y	T	F	D	K	D	G	N	I	E	Y	K	Y	P	D	F	P	I	F	K	R	D	V	L	N	K	A
Template Known Secondary structure		T	T																.												T				S	S	S																T						S	S	S	S				S	S		S								T
Template Predicted Secondary structure																			.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		246	.	.	.	250	.	.	.	.	.			.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure												.	.						.	.
Query SS confidence												.	.						.	.
Query Sequence		M	E	Q	L	R	E	I	G	Y	L	.	.	D	Y	T	E	I	.	.	Q	R	G	R	T	K	F	F	C	I	H	Y	R	R	P	R
Query Conservation												.	.						.	.
Alig confidence												.	.						.	.
Template Conservation
Template Sequence		I	A	E	I	K	K	K	T	E	I	S	F	V	G	F	T	V	H	E	K	E	G	R	K	I	S	K	L	K	F	E	F	V	V	D
Template Known Secondary structure									S	S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions