Return to main results Retrieve Phyre Job Id

Job DescriptionQ57154
Confidence24.59%DateThu Jan 5 12:37:14 GMT 2012
Rank61Aligned Residues41
% Identity12%Templated2dk5a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain RPO3F domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   220.........230.........240.........250.........260. .......
Predicted Secondary structure 










....

Query SS confidence 









































. . . .






Query Sequence  ISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQ. . . . RGRTKFF
Query Conservation 

  





 
 
    

  







  



     
....       
Alig confidence 















......














..


....






Template Conservation 

   
  

 
    ......
 



 

 
 


.. 

 
    

 
 
Template Sequence  IWSRDVRYKSNLPLTE. . . . . . INKILKNLESKKLIK. . AVKSVAASKKKVYM
Template Known Secondary structure  TT

......TTS..

SS
SS

Template Predicted Secondary structure 





......


..





Template SS confidence 




















































   37..40.........50.. .......60....... ..70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions