Job Description Q57154 Confidence 53.32% Date Thu Jan 5 12:37:14 GMT 2012 Rank 26 Aligned Residues 93 % Identity 15% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	S	L	A	R	L	R	A	R	L	N	L	K	S	P	V	F	S	Q	N	Q	T	V	R	R	A	M	E	Q	L	R	E	I	G	Y	L	D	Y	T	E	I	Q	R	G	R	T	K	F	F	C	I	H	Y	R	R	P	R	L	K	A	P	N	D	E	S	K	E	N	P	L	P	P	S	P	A	E	K	V	S
Query Conservation
Alig confidence																				.	.																			.
Template Conservation																				.	.																			.
Template Sequence		Y	A	S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	.	.	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	.	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	S	K	N	F	I	N	K	V	Y	K	G	G	F	N	S	L	V	L
Template Known Secondary structure		S																		.	.															T	S			.					T	T							S	S																		S	T	T
Template Predicted Secondary structure																				.	.																			.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	M	A	E	K	L	A	L	L	E	K	L	G	I	T	L	D	D	L	E	K	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	N	F	V	E	K	E	D	L	S	Q	D	E	I	E	E	L
Template Known Secondary structure		.	.	.	.	.	.	.						S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions