Job Description Q57154 Confidence 18.72% Date Thu Jan 5 12:37:14 GMT 2012 Rank 88 Aligned Residues 61 % Identity 20% Template c3nqoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:marr-family transcriptional regulator; PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution Resolution 2.20 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	Q	A	L	Y	T	F	I	E	S	L	P	R	D	P	A	P	I	S	L	A	R	L	R	A	R	L	N	L	K	S	P	V	F	S	Q	N	Q	T	V	R	R	A	M	E	Q	L	R	E	I	G	Y	L	D	Y	T	E	I	Q	R	G	R	T	K	F	F	C
Query Conservation
Alig confidence													.																				.	.	.	.	.	.
Template Conservation													.																				.	.	.	.	.	.
Template Sequence		S	R	Q	Y	X	T	I	L	S	I	L	.	H	L	P	E	E	E	T	T	L	N	N	I	A	R	K	X	G	T	S	.	.	.	.	.	.	K	Q	N	I	N	R	L	V	A	N	L	E	K	N	G	Y	V	D	V	I	P	S	P	H	D	K	R	A	I	N	V
Template Known Secondary structure													.	T	S		G	G	G											T	S		.	.	.	.	.	.														T	T	S							S	S		T	T
Template Predicted Secondary structure													.																				.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions