Job Description Q57154 Confidence 48.44% Date Thu Jan 5 12:37:14 GMT 2012 Rank 29 Aligned Residues 43 % Identity 35% Template c3ltiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: crystal structure of the escherichia coli rna polymerase beta subunit2 beta2-betai4 domains Resolution 1.60 Å

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		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	L	D	Y	T	E	I	Q	R	G	R	T	K	F	F	C	I	H	Y	R	R	P	R	L	K	A	P	N	D	E	S	K	E	N	P	L	P	P	S	P	A	E	K	V	S	P	E	M	A	E	K	L	A	L	L	E	K	L	G	I	T	L	D	D	L	E	K	L	F
Query Conservation
Alig confidence													.							.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.							.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	W	L	D	F	E	F	D	P	K	D	.	N	L	F	V	R	I	.	D	R	R	R	K	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	I	L	R	A	L	N	Y	T	T	E	Q	I	L	D	L	F
Template Known Secondary structure										T	T	S	.							.	T	T						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure													.							.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.		.	200	.	.	.	.	.	.																										.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions