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Job Description | Q57154 | Confidence | 16.23% | Date | Thu Jan 5 12:37:14 GMT 2012 |
Rank | 100 | Aligned Residues | 88 |
% Identity | 14% | Template | c3eyyA_ |
PDB info |
PDB header:transport | Chain: A: PDB Molecule:putative iron uptake regulatory protein; |
PDBTitle: structural basis for the specialization of nur, a nickel-2 specific fur homologue, in metal sensing and dna3 recognition
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Resolution | 2.40 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
K | A | I | N | A | L | K | R | R | E | S | A | Q | A | L | Y | T | F | I | E | S | L | P | R | D | P | A | P | I | S | L | A | R | L | R | A | R | L | N | L | K | S | P | V | F | S | Q | N | Q | T | V | R | R | A | M | E | Q | L | R | E | I | G | Y | L | D | Y | T | E | I | Q | R | G | R | T | K | F | F | C | I | H |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | D | L | R | Q | R | G | Y | R | L | T | P | Q | R | Q | L | V | L | . |
E | A | V | D | T | L | E | . |
H | A | T | P | D | D | I | L | G | E | V | . |
R | K | T | A | S | G | I | N | I | S | T | V | Y | R | T | L | E | L | L | E | E | L | G | L | V | S | . |
H | A | H | L | G | H | G | A | P | T | Y | H | L | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
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. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
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272 | . | . | . | . | . | . | . | 280 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | R | R | P | R | L | K | A | P | N | D | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | R | H | H | H | I | H | L | V | C | R | D |
Template Known Secondary structure |   |
T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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84 | . | . | . | . | . | 90 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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