Return to main results Retrieve Phyre Job Id

Job DescriptionP15005
Confidence99.59%DateThu Jan 5 11:34:08 GMT 2012
Rank18Aligned Residues234
% Identity16%Templated1um8a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  IETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFC
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Template Sequence  LEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIA. . ISDATSLTVENILTRLLQAS. . . . . . . . . . DWNVQKA.
Template Known Secondary structure  TT






TTSSTT

..GGG


TT..........TT
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   132.......140.........150.........160.........170. ........180.........190. .......
 
   264.....270.........280.........290.........300.........310....... ..320.........330.....
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Query Sequence  QQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDE. . . . . . . . ERFYVPENVYIIGLMNTA
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Template Sequence  . . . . . . . . QKGIVFIDEIDKIGEG. VQQALLKIVEGSLVNQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSK
Template Known Secondary structure  ........TTSTGGG

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TT


TTTTTS
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SS

T
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   207..210.........220.. .......230.........240.........250.........260.........270.......
 
   336...340.........350.........360.........370.........380.........390.........400.........410.....
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Query Sequence  DRSLAVVDYALRRRFSFIDIEPGFDTPQFRNFLLNKKAEPSFVESLCQKMNELNQEISKEATILGKGFRIGHSYFCCGLE
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Template Sequence  KEQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQ
Template Known Secondary structure  TTTTTSGGG

TT

TT






SSTT
TTT

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   307..310.........320.........330.........340.........350.........360.........370.........380......
 
   416...420.........430.........
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Query Sequence  . . DGTSPDTQWLNEIVMTDIAPLLEE
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Template Sequence  LALERKTGARGLRAIIEDFCLDIMFD
Template Known Secondary structure  TT
TGGGT
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   387..390.........400.........410..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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