Return to main results Retrieve Phyre Job Id

Job DescriptionP15005
Confidence99.38%DateThu Jan 5 11:34:08 GMT 2012
Rank45Aligned Residues175
% Identity21%Templated1r6bx2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   167..170.........180.........190..... ....200.........210.........220.........230.........240....
Predicted Secondary structure 






..

















Query SS confidence 




























. .
















































Query Sequence  SYCLEDALNDLFIPETTIETILKRLTIKK. . NIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQG
Query Conservation                          
    .. 


 







 

  

  
           
           
 
Alig confidence 




























..









































.......
Template Conservation     
    
 



   
  
   
       


 







  
  

  
                   .......
Template Sequence  QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI. . . . . . .
Template Known Secondary structure  TT
S



S
TSSSS


TTSST
S
GGGTT



.......
Template Predicted Secondary structure 































.......
Template SS confidence 















































































   178.180.........190.........200.........210.........220.........230.........240.........250
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  YRPNGVGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPE
Query Conservation              
        
        







 
     
   
 


                       

 
Alig confidence  .























..










............
























....
Template Conservation  .                        ..   

 


  ............ 
                
      .... 
Template Sequence  . GAGTKYRGDFEKRFKALLKQLEQD. . TNSILFIDEIH. . . . . . . . . . . . TIIGAGAASGGQVDAANLIKPLLSS. . . . G
Template Known Secondary structure  .





SS
SSS..S
TTTT............TTTTS

SSS
SS
SSS....
Template Predicted Secondary structure  .





..




............







....
Template SS confidence 















































































   251........260.........270.... .....280..... ....290.........300.........310 .
 
   325....330...... ...340.........350.........360.......
Predicted Secondary structure 


.












Query SS confidence 











.






























Query Sequence  NVYIIGLMNTAD. RSLAVVDYALRRRFSFIDIEPGFDTPQFRNF
Query Conservation 

 



 
  
. 
   

 

 


  
 
 
          
Alig confidence 











.






























Template Conservation      
                   
    
            

Template Sequence  KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII
Template Known Secondary structure 







TTSSGGG




Template Predicted Secondary structure 















Template SS confidence 











































   315....320.........330.........340.........350........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions