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Job DescriptionP15005
Confidence99.69%DateThu Jan 5 11:34:08 GMT 2012
Rank10Aligned Residues248
% Identity15%Templated1qvra3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   158.160.........170.........180.........190... ......200.........210.........220......
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Query Sequence  VIPPMSKTESYCLEDALNDLFIPETTIETILKRLTI. . . . . . . . . . . KKNIILQGPPGVGKTFVARRLAYLLTGEKAPQR
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Template Sequence  LLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEA. .
Template Known Secondary structure  TT

SS
S
GGG
S
SSS
SBS
SSSSSSGGG..
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   541........550.........560.........570.........580.........590.........600.........610........
 
   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  VNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENW
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Template Sequence  MIRIDM. TEYMEKHAVS. . . . . . . . . . . . RLQLTEAVRR. . . . . RPYSVILFDEIEKAHPD. VFNILLQILDDGRLTDSH
Template Known Secondary structure 
T.TT

SSGGGG............G

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SSSSGGGS
.TTT

SS
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   619620.... .....630.... .....640.... .....650.........660. ........670.........
 
   307..310.........320.........330... ......340.........350.........360.........370..
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Query Sequence  SVPLTYSENDEERFYVPENVYIIGLMN. . . . . . . . . . . . . . TADRSLAVVDYALRRRFSFIDIEPGFDTPQFRNFLLNKK
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Template Sequence  GRTVDF. . . . . . . . . . . RNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHF. . . . . RPEFLNRLDEIVVFRPL
Template Known Secondary structure  S


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TTTT

TTS.....
T
SB

B



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   694..... 700.........710.........720.........730.........740 .........750.......
 
   373......380.........390.........400.........410.........420.........430.........440....
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Query Sequence  AEPSFVESLCQKMNELNQEISKEATILGKGFRIGHSYFCCGLEDGTSPDTQWLNEIVMTDIAPLLEEYFFDD
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Template Sequence  TKEQIRQIVEIQLSYLRARLAEKRISL. . ELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAG
Template Known Secondary structure 
TTT
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   758.760.........770.........780.... .....790.........800.........810.........820.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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