Job Description P15005 Confidence 96.44% Date Thu Jan 5 11:34:08 GMT 2012 Rank 348 Aligned Residues 127 % Identity 17% Template c4a4zA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:antiviral helicase ski2; PDBTitle: crystal structure of the s. cerevisiae dexh helicase ski2 bound to2 amppnp Resolution 2.40 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.												.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.													.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.													.	.	.
Query Sequence		E	T	I	L	K	R	L	T	I	K	K	N	I	I	L	Q	G	P	P	G	V	G	K	T	F	V	A	R	R	L	A	Y	L	L	T	G	E	K	A	P	Q	R	V	N	M	V	Q	F	.	.	.	.	.	.	.	.	.	.	.	H	Q	S	Y	S	Y	E	D	F	I	Q	G	.	.	.	Y	R	P	N	G	V
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.													.	.	.
Alig confidence																														.																				.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																														.
Template Sequence		K	E	A	V	Y	H	L	E	Q	G	D	S	V	F	V	A	A	H	T	S	A	G	K	T	V	V	A	E	.	Y	A	I	A	M	A	H	R	N	M	T	K	T	I	Y	T	S	P	I	K	A	L	S	N	Q	K	F	R	D	F	K	E	T	F	V	N	I	G	L	I	T	G	D	V	Q	I	N	P	D	A	N
Template Known Secondary structure										T	T									T	T	S		S						.									T	T								S		G	G	G										T	T									S	S					T	T	S	S
Template Predicted Secondary structure																														.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		G	F	R	R	K	D	G	I	F	Y	N	F	C	Q	Q	A	K	E	Q	P	E	K	K	Y	I	F	I	I	D	E	I	N	R	A	N	L	S	.	.	.	K	V	F	G	E	V	M	M	L	M	E	H	D	K	R	G	E	N	W	S	V	P	L	T	Y
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.
Template Conservation
Template Sequence		C	L	I	M	T	T	E	I	L	R	S	M	L	Y	R	G	A	D	L	I	R	D	V	E	F	V	I	F	D	E	V	H	Y	V	N	D	Q	D	R	G	V	V	W	E	E	V	I	I	M	L	P	Q	H	V	K	F	I	L	L	S	A	T	V	P	N
Template Known Secondary structure																	T		S	G	G	G	G									T	T				T	T		T	T										S		T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions