Job Description P15005 Confidence 99.53% Date Thu Jan 5 11:34:08 GMT 2012 Rank 23 Aligned Residues 157 % Identity 17% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	I	E	T	I	L	K	R	L	T	I	K	K	N	I	I	L	Q	G	P	P	G	V	G	K	T	F	V	A	R	R	L	A	Y	L	L	T	G	E	K	A	P	Q	R	V	N	M	V	Q	F	H	Q	S	Y	S	Y	E	D	F	I	Q	G	Y	R	P	N	G	V	G	F	R	R	K	D	G	I	F	Y	N
Query Conservation
Alig confidence																																																																								.	.
Template Conservation																																																																								.	.
Template Sequence		K	K	C	M	Q	F	Y	Y	M	Q	K	T	Q	Q	A	L	I	L	V	G	K	A	G	C	G	K	T	A	T	W	K	T	V	I	D	A	M	A	I	F	D	G	H	A	N	V	V	Y	V	I	D	T	K	V	L	T	K	E	S	L	Y	G	S	M	L	K	A	T	L	E	.	.	W	R	D	G	L	F	T	S
Template Known Secondary structure												S	S										T	T	S	S	T	T													T	S	S										S	S	S		T	T	S	S	S	S	S	S				S	S	T	T	.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		2055	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.			.	.	.	.	.	2130	.	.
		262	.	.	.	.	.	.						.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																											.
Query SS confidence									.	.	.	.	.																											.
Query Sequence		F	C	Q	Q	A	K	E	.	.	.	.	.	Q	P	E	K	K	Y	I	F	I	I	D	E	I	N	R	A	N	L	S	K	V	F	G	E	V	M	.	M	L	M	E	H	D	K	R	G	E	N	W	S	V	P	L	T	Y	S	E	N	D	E	E	R	F	Y	V	P	E	N	V	Y	I	I	G	L	M	N	T	A
Query Conservation									.	.	.	.	.																											.
Alig confidence									.	.	.	.	.												.	.	.	.												.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																									.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		I	L	R	R	V	N	D	D	I	T	G	T	F	K	N	S	R	I	W	V	V	F	D	.	.	.	.	S	D	L	D	P	E	Y	V	E	A	M	N	S	V	L	D	D	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	R	L	P	I	P	P	N	F	R	I	L	F	E	T	D	N	.
Template Known Secondary structure									S	S			S	S										S	.	.	.	.	S		S		S	T	T							T	T		B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B												S			.
Template Predicted Secondary structure																									.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		2133	.	.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.					.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.																.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	S	L	A	V	V	D	Y	A	L	R	R	R	F	S	F	I	D	I	E	P	G	F	D	T	P	Q
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	D	H	T	T	P	A	T	I	T	R	C	G	L	L	W	F	S	S	K	I	D	H	L	L
Template Known Secondary structure		.	.	.	S	T	T					T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					2199	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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