Job Description P15005 Confidence 99.89% Date Thu Jan 5 11:34:08 GMT 2012 Rank 3 Aligned Residues 232 % Identity 19% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.												.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		P	M	S	K	T	E	S	Y	C	L	E	D	A	L	N	D	L	F	I	P	E	T	T	I	E	T	I	L	K	R	L	T	I	K	K	N	.	.	.	.	.	.	.	.	.	.	.	I	I	L	Q	G	P	P	G	V	G	K	T	F	V	A	R	R	L	A	Y	L	L	T	G	E	K	A	P	.	Q	R	V	N
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		T	E	T	D	K	L	L	N	M	E	N	I	L	H	S	R	V	I	G	Q	D	E	A	V	V	A	V	A	K	A	V	R	R	A	R	A	G	L	K	D	P	K	R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E	L	A	R	A	L	A	E	S	I	F	G	D	E	E	S	M	I	R	I	D
Template Known Secondary structure									T							T	T	S		S																T	T	T		S		T	T	S		S							S		T	T	S	S														S		T	T
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	Q	F	H	Q	S	Y	S	Y	E	D	F	I	Q	G	Y	R	P	N	G	V	G	F	R	R	K	D	G	I	F	Y	N	F	C	Q	Q	A	K	E	Q	P	E	K	K	Y	I	F	I	I	D	E	I	N	R	A	N	L	S	K	V	F	G	E	V	M	M	L	M	E	H	D	K	R	G	E	N	W	S	V
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																		.																	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																		.																	.	.	.	.
Template Sequence		M	S	E	Y	M	E	K	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	L	T	E	K	V	R	R	.	.	.	.	.	K	P	Y	S	V	V	L	L	D	A	I	E	K	A	H	P	D	.	V	F	N	I	L	L	Q	V	L	E	D	G	R	L	T	T	.	.	.	.
Template Known Secondary structure		G	G	G	G		S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.		S	S	S							G	G	G	S				.												S	B				.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																		.																	.	.	.	.
Template SS confidence
		574	.	.	.	.	.	580	.	.																				.	.	.	.	.	.	.	590	.						.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.		.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	T	Y	S	E	N	D	E	E	R	F	Y	V	P	E	N	V	Y	I	I	G	L	M	N	T	A	D	R	S	L	A	V	V	D	Y	A	L	R	R	R	F	S	F	I	D	I	E	P	G	F	D	T	P	Q	F	R	N	F	L	L	N	K	K	A	E	P	S	F	V	E	S	L	C	Q	K	M	N	E	L
Query Conservation
Alig confidence		.				.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.
Template Conservation		.				.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.
Template Sequence		.	V	D	F	.	.	.	.	.	.	.	.	.	.	.	R	N	T	I	L	I	M	T	S	N	V	G	A	S	E	K	D	K	V	M	G	E	L	K	R	A	F	.	.	.	.	.	R	P	E	F	I	N	R	I	D	E	I	I	V	F	H	E	K	.	.	K	H	L	T	E	I	V	S	L	M	S	D	Q	L
Template Known Secondary structure		.		B		.	.	.	.	.	.	.	.	.	.	.	T	T								S	S	S	T	T													S	.	.	.	.	.						T	T	S	S									.	.
Template Predicted Secondary structure		.				.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.																		.	.
Template SS confidence
			647	.	.												650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.						.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.			.	.	.	.	.	.	700	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.			.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		N	Q	E	I	S	K	E	A	T	I	L	G	K	G	F	R	I	G	H	S	Y	F	C	C	G	L	E	.	.	D	G	T	S	P	D	T	Q	W	L	N	E	I	V	M	T	D	I	A	P	L	L	E	E	Y	F	F	D	D
Query Conservation																													.	.
Alig confidence											.	.	.	.															.	.
Template Conservation											.	.	.	.
Template Sequence		T	K	R	L	K	E	Q	D	L	.	.	.	.	S	I	E	L	T	D	A	A	K	A	K	V	A	E	E	G	V	D	L	E	Y	G	A	R	P	L	R	R	A	I	Q	K	H	V	E	D	R	L	S	E	E	L	L	R	G
Template Known Secondary structure							T	T	T		.	.	.	.														G	G	G			T	T	T	T	T	T	T									T										T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		731	.	.	.	.	.	.	.	.					740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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