Return to main results Retrieve Phyre Job Id

Job DescriptionP15005
Confidence99.43%DateThu Jan 5 11:34:08 GMT 2012
Rank37Aligned Residues118
% Identity22%Templatec3pvsA_
PDB info PDB header:recombinationChain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210.........220.........230.........240.........250.........260.........270....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  KNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPEKKY
Query Conservation    


 







 

  

  
           
           
 
            
        
        
Alig confidence 
























.......


















.............










..


Template Conservation   



 










  

    .......  

 


    
  

 
.............
  
       ..   
Template Sequence  HSMILWGPPGTGKTTLAEVIARYAN. . . . . . . ADVERISAVTSGVKEIREA. . . . . . . . . . . . . IERARQNRNAG. . RRT
Template Known Secondary structure 

STTSSTT.......
TTT

.............TT..

Template Predicted Secondary structure 








.......






.............

..


Template SS confidence 















































































   51........60.........70..... ....80.........90.... .....100..... ...
 
   275....280.........290.........300.........310.........320.........330.........340.........350....
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  IFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRFSFID
Query Conservation 







 
     
   
 


                       

 

 



 
  
 
   

 

 


  
 
Alig confidence 









.......









........................










..















Template Conservation 






 

.......


  

   ........................



 




 ..   
  

 

  

 
Template Sequence  ILFVDEVHRF. . . . . . . AFLPHIEDGT. . . . . . . . . . . . . . . . . . . . . . . . ITFIGATTENP. . SFELNSALLSRARVYL
Template Known Secondary structure  TTT

.......

TTS........................
SS
G..GGSS
TT
Template Predicted Secondary structure 
.......


........................



..

Template SS confidence 















































































   109110........ .120........ .130......... 140.........150.....
 
   355....360.......
Predicted Secondary structure 



Query SS confidence 












Query Sequence  IEPGFDTPQFRNF
Query Conservation 
 
          
Alig confidence 












Template Conservation 
  

 


  

Template Sequence  LKSLSTEDIEQVL
Template Known Secondary structure 




Template Predicted Secondary structure 



Template SS confidence 












   162.......170....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions