Job Description P15005 Confidence 99.35% Date Thu Jan 5 11:34:08 GMT 2012 Rank 49 Aligned Residues 165 % Identity 29% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	D	L	F	I	P	E	T	T	I	E	T	I	L	K	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	K	K	N	I	I	L	Q	G	P	P	G	V	G	K	T	F	V	A	R	R	L	A	Y	L	L	T	G	E	K	A	P	Q	R	V	N	M	V	Q	F	H	Q	S	Y	S	Y
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	T	N	A	T	.	.	.	.	.	F	I	R	V	V	G	S	E	L	V	K	K
Template Known Secondary structure		G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												T	T			.	.	.	.	.						G	G	G	S
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	F	I	Q	G	Y	R	P	N	G	V	G	F	R	R	K	D	G	I	F	Y	N	F	C	Q	Q	A	K	E	Q	P	E	K	K	Y	I	F	I	I	D	E	I	N	R	A	N	L	S	K	V	F	G	E	V	M	M	L	M	E	H	D	K	R	G	E	N	W	S	V	P	L	T	Y	S	E	N	D	E	E
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.	.	.
Template Sequence		F	I	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	A	S	L	V	K	D	I	F	K	L	A	K	E	K	.	.	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	.	.	.	.	.	.	.	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D
Template Known Secondary structure		S	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T													T	.	.		S								G	G	G	T	S	B		.	.	.	.	.	.	.		S	S	S				S	T														T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.													.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.								.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		R	F	Y	V	P	E	N	V	Y	I	I	G	L	M	N	T	A	D	R	S	L	A	V	V	D	Y	A	L	R	R	R	.	.	F	S	F	I	D	I	E	P	G	F	D	T	P	Q	F	R	N	F	L
Query Conservation																																	.	.
Alig confidence																					.	.	.	.									.	.
Template Conservation																					.	.	.	.
Template Sequence		G	F	D	A	R	G	D	V	K	I	I	G	A	T	N	R	P	D	I	.	.	.	.	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K	G	R	L	E	I	L
Template Known Secondary structure		S	S		S	S	S	S								S	S	G	G	G	.	.	.	.	B						S	T	T	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions