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Job DescriptionP15005
Confidence96.08%DateThu Jan 5 11:34:08 GMT 2012
Rank376Aligned Residues151
% Identity10%Templatec3dkpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable atp-dependent rna helicase ddx52; PDBTitle: human dead-box rna-helicase ddx52, conserved domain i in complex with2 adp
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210.........220.........230.........240.......
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Query Sequence  ETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRP. . . . . . . . . . . . . . . . .
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Template Sequence  MQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAA
Template Known Secondary structure  TT



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   193......200.........210.........220.........230.........240.........250.........260.........270..
 
   248.250.........260........ .270.........280.........290.........300.........310...
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Query Sequence  . . . . . . . . . . . . NGVGFRRKDGIFYNFCQQAKE. . QPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYS
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Template Sequence  VAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGGFRDQLASIFLAC. . . . . . . . . . . .
Template Known Secondary structure  TTTSTTS





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   273......280.........290.........300.........310.........320.........330.........340
 
   314.....320.........330.........340.........350.....
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Query Sequence  ENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRFSFIDI
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Template Sequence  . . . . . . . . TSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSI
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TT
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   343......350.........360.........370......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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