Job Description P15005 Confidence 95.40% Date Thu Jan 5 11:34:08 GMT 2012 Rank 439 Aligned Residues 98 % Identity 12% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.															.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	I	K	K	N	I	I	L	Q	G	P	P	G	V	G	K	T	F	.	V	A	R	R	L	A	Y	L	L	T	G	E	K	A	P	Q	R	V	N	M	V	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	S	Y	S	Y	E	D	F	I	Q	G	Y	R	P	N	G	V	G	F	R	R	K
Query Conservation																					.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		F	R	K	K	R	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	R	R	L	R	T	.	L	I	L	A	P	T	R	V	V	A	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	T	P	A	V	K	S	D	H	T	G	R	E	I	V	D	L	M	C
Template Known Secondary structure			S	T	T									T	T	T			T	T	T												T	T				.					S	S											T	T	T	S							T	T		S						S	S
Template Predicted Secondary structure																																						.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	I	F	Y	N	F	C	Q	Q	A	K	E	Q	P	E	K	K	Y	I	F	I	I	D	E	I	N	R	A	N	L	S	K	V	F
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		H	A	T	F	T	T	R	L	L	S	.	S	T	R	V	P	N	Y	N	L	I	V	M	D	E	A	H	F	T	D	P	C	S	V	A
Template Known Secondary structure												.		S						S						S	T	T			S
Template Predicted Secondary structure												.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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