Return to main results Retrieve Phyre Job Id

Job DescriptionP15005
Confidence97.59%DateThu Jan 5 11:34:08 GMT 2012
Rank175Aligned Residues102
% Identity18%Templatec2gzaB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:type iv secretion system protein virb11; PDBTitle: crystal structure of the virb11 atpase from the brucella suis type iv2 secretion system in complex with sulphate
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   170.........180.........190.........200.........210.........220.........230.........240.........
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  LEDALNDLFIPETTIETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNG
Query Conservation                       
     


 







 

  

  
           
           
 
     
Alig confidence 



















































...















.....



Template Conservation                  

         


 
 








 


  
   ... 






  

 
  .....    
Template Sequence  FEQELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFD. . . QRLITIEDVPELFLPD. . . . . HPNH
Template Known Secondary structure  T
TT

STTSSTTS
TT...S
SSS



TT.....
SS
Template Predicted Secondary structure 


















...






.....


Template SS confidence 















































































   151........160.........170.........180.........190.........200.. .......210........ .220..
 
   250.........260.........270.........280.
Predicted Secondary structure 











Query SS confidence 































Query Sequence  VGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEI
Query Conservation         
        
        






Alig confidence 



















..









Template Conservation               
   

 .. 

 





Template Sequence  VHLFYPPVTAATLLRSCLRM. . KPTRILLAEL
Template Known Secondary structure 




TTS..

SS

Template Predicted Secondary structure 






..




Template SS confidence 































   223......230.........240.. .......250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions