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Job DescriptionP15005
Confidence99.91%DateThu Jan 5 11:34:08 GMT 2012
Rank2Aligned Residues216
% Identity19%Templatec1r6bX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:clpa protein; PDBTitle: high resolution crystal structure of clpa
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  TIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPE
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Template Sequence  KPVGSFLFAGPTGVGKTEVTVQLSKALGIELL. . RFDMSEYMERHTVSRLIG. . APPGYVGFDQGGLLTDAVIK. . . . . H
Template Known Secondary structure  S
S
STTSST
..GGG
SSSS

SSS

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S
STT.....
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   486...490.........500.........510....... ..520.........530..... ....540.........550..... .
 
   272.......280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  KKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRFS
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Template Sequence  PHAVLLLDEIEKAHPD. VFNILLQVMDNGTLTDNNGRKADF. . . . . . . . . . . RNVVLVMTTNAGVR. . . . AMEEIKKIF.
Template Known Secondary structure  SSTGGGS
.STTT
...........TT
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   557..560.........570.. .......580.........590...... ...600.........610 .........
 
   352.......360.........370.........380.........390.........400.........410..... ....420.........
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Query Sequence  FIDIEPGFDTPQFRNFLLNKKAEPSFVESLCQKMNELNQEISKEATILGKGFRIGHSYFCCGLE. . DGTSPDTQWLNEIV
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Template Sequence  . . . . TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV. . . . SLEVSQEARNWLAEKGYDRAMGARPMARVI
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TT
S




TT....

BTTTBTTT
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   637..640.........650.........660.........670........ .680.........690.........700........
 
   430.........440.
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Query Sequence  MTDIAPLLEEYF
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Template Sequence  QDNLKKPLANEL
Template Known Secondary structure  T
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   709710.........720
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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