Job Description P75678 Confidence 99.52% Date Thu Jan 5 12:12:57 GMT 2012 Rank 113 Aligned Residues 188 % Identity 14% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	N	S	E	G	L	K	S	F	Q	Q	S	L	A	D	L	P	Q	W	V	S	E	R	L	L	Q	Q	I	N	Q	L	T	N	Y	E	P	V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q
Query Conservation
Alig confidence																												.	.	.																																						.	.	.	.
Template Conservation																												.	.	.																																						.	.	.	.
Template Sequence		T	V	N	E	A	G	E	T	A	L	D	I	A	R	K	K	H	H	K	E	C	E	E	L	L	E	.	.	.	Q	A	Q	A	N	K	E	M	R	I	L	M	L	G	L	D	A	A	G	K	T	T	I	L	Y	K	L	K	L	G	Q	S	V	T	T	I	P	.	.	.	.	T	V	G	F	N	V	E	T	V	T
Template Known Secondary structure					T	T											T	T		T	T							.	.	.		T													S	T	T	S	S											S	S							.	.	.	.		S	S
Template Predicted Secondary structure																												.	.	.																																						.	.	.	.
Template SS confidence
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.				.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.					.	.	.	.	.	.	.	720	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		V	G	D	R	Y	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	.	.	.	Y	R	H	K	V	L	F	V	I	S	Q	S	D	K
Query Conservation																																																																	.	.	.
Alig confidence																					.	.	.	.	.	.	.																																						.	.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		Y	K	N	V	K	F	N	V	W	D	V	G	G	Q	D	K	I	R	P	.	.	.	.	.	.	.	L	W	R	H	Y	Y	T	G	T	Q	G	L	I	F	V	V	D	C	A	D	R	D	R	I	D	E	A	R	Q	E	L	H	R	I	I	N	D	R	E	M	R	D	A	I	I	L	I	F	A	N	K	Q	D	L
Template Known Secondary structure			S	S												G	G	G	S	T	.	.	.	.	.	.	.	T	G	G	G	G	T	T	T										S	S			T	T													T	S	T	T		T	T										T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V	S	V	R	L	Q	W	G	L	K	V	M	A	E	R	M	I	K
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	A	M	K	.	.	.	.	.	.	.	.	.	.	P	H	E	I	Q	E	K	L	G	L	T	R	I	R	D	R	N	W	Y	V	Q	P	S	C	A	T	S	G	D	G	L	Y	E	G	L	T	W	L	T	S
Template Known Secondary structure		S	S				.	.	.	.	.	.	.	.	.	.								T	T		T	T			S	S								B	T	T	T	T	B	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.											.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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