Job Description P75678 Confidence 99.93% Date Thu Jan 5 12:12:57 GMT 2012 Rank 6 Aligned Residues 199 % Identity 23% Template c3ievA_ PDB info PDB header:nucleotide binding protein/rna Chain: A: PDB Molecule:gtp-binding protein era; PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna Resolution 1.90 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																			.																												.	.	.
Query SS confidence																																																			.																												.	.	.
Query Sequence		Y	E	P	V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	.	R	Y	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	.	.	.
Query Conservation																																																			.																												.	.	.
Alig confidence																																																			.																												.	.	.
Template Conservation
Template Sequence		K	V	G	Y	V	A	I	V	G	K	P	N	V	G	K	S	T	L	L	N	N	L	L	G	T	K	V	S	I	I	S	P	K	A	G	T	T	R	M	R	V	L	G	V	K	N	I	P	N	E	A	Q	I	I	F	L	D	T	P	G	I	Y	E	P	K	K	S	D	V	L	G	H	S	M	V	E	I	A	K	Q
Template Known Secondary structure											S	T	T	S	S										T	S			S				S	S	S					S									T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	P	R	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	Y	R	H	K	V	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H
Query Conservation
Alig confidence																														.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	E	E	A	D	V	I	L	F	M	I	D	A	T	E	G	W	R	P	R	D	E	E	I	Y	Q	N	.	F	I	K	P	L	N	K	P	V	I	V	V	I	N	K	I	D	K	I	G	P	A	K	.	.	.	.	.	.	.	.	.	.	.	N	V	L	P	L	I	D	E	I	H	K	K	H	P	E	L	T
Template Known Secondary structure							S								T	T	T	B	S											.		T	G	G	G											G	G	G	S	S	S	G	G	.	.	.	.	.	.	.	.	.	.	.	G	G												T	T
Template Predicted Secondary structure																														.																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.												.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	C	A	V	S	V	R	L	Q	W	G	L	K	V	M	A	E	R	M	I	K	C	L	P	R	E	A	T	S	P	V	V	S	Q	L	H	P	S	F	R	T	T	V	V	R	E	Q	A	R	S	D	F	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	V	P	I	S	A	L	K	G	A	N	L	D	E	L	V	K	T	I	L	K	Y	L	P	E	G	E	P	L	F	P	E	D	M	I	T	D	L	P	L	R	L	L	A	A	E	I	V	R	E	K	A	M	M
Template Known Secondary structure							B	T	T	T	T	B	S												S		B				S	S		T	T			B
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions