Job Description P75678 Confidence 99.53% Date Thu Jan 5 12:12:57 GMT 2012 Rank 111 Aligned Residues 159 % Identity 13% Template c3agqA_ PDB info PDB header:translation,transferase Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii Resolution 3.22 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	R	Y	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L
Query Conservation
Alig confidence																										.	.	.	.												.	.	.																		.	.	.	.	.	.	.
Template Conservation																										.	.	.	.												.	.	.																		.	.	.	.	.	.	.
Template Sequence		H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	.	.	.	.	L	A	K	T	Y	G	G	T	S	H	V	.	.	.	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	.	.	.	.	.	.	.	A	D	Y	V	K	N	M	I	T	G	A	A	Q	M
Template Known Secondary structure											T	T	S	S												.	.	.	.	T	T	T	T	S							.	.	.					S	S												.	.	.	.	.	.	.										T	S
Template Predicted Secondary structure																										.	.	.	.												.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.								.	.	350	.	.	.	.	.	.	.	.	.	360	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		D	L	V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	Y	R	H	K	.	V	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A
Query Conservation																																		.
Alig confidence																							.	.										.																													.	.	.	.	.
Template Conservation																							.	.																																							.	.	.	.	.
Template Sequence		D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	.	.	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	.	.	.	.	.	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R
Template Known Secondary structure		S								T	T	T		S		G	G	G					.	.						T	T		S										T	T		S		T	T	T												T	.	.	.	.	.	G	G	G	T	S		T	T	T
Template Predicted Secondary structure																							.	.																																							.	.	.	.	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.			.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.						.	.	.	.	.	.	.	450	.	.	.	.	.	.
		195	.	.	.	.	200									.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.
Query Sequence		V	S	V	R	L	Q	.	.	.	.	.	.	.	.	W	G	L	K	V	M	A	E	R	M	I	K	C	L	P
Query Conservation								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P
Template Known Secondary structure				T	T	T	T	T	T	T																		T	S
Template Predicted Secondary structure
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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