Job Description P75678 Confidence 99.05% Date Thu Jan 5 12:12:57 GMT 2012 Rank 222 Aligned Residues 161 % Identity 15% Template c2p5sB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:ras and ef-hand domain containing; PDBTitle: rab domain of human rasef in complex with gdp Resolution 2.15 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	R	Y	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Sequence		A	Y	K	I	V	L	A	G	D	A	A	V	G	K	S	S	F	L	M	R	L	C	K	N	E	F	.	.	.	.	.	.	.	.	R	G	V	D	F	Q	M	K	T	L	I	V	D	G	E	R	T	V	L	Q	L	W	D	T	A	G	Q	E	R	F	R	S	.	.	.	.	.	I	A	K	S	Y	F	R	K	A
Template Known Secondary structure									S	S	T	T	S	S											S			.	.	.	.	.	.	.	.													T	T											T	T		T	T				.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template SS confidence
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.									.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.						.	600	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	Y	R	H	K	V	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V
Query Conservation
Alig confidence																									.																																										.	.	.	.	.	.	.
Template Conservation																									.																																										.	.	.	.	.	.	.
Template Sequence		D	G	V	L	L	L	Y	D	V	T	C	E	K	S	F	L	N	I	R	E	W	V	D	.	M	I	E	D	A	A	V	P	I	M	L	V	G	N	K	A	D	I	R	D	T	A	A	T	E	G	Q	K	C	V	P	G	H	F	G	E	K	L	A	M	T	.	.	.	.	.	.	.	Y	G	A	L	F	C	E	T
Template Known Secondary structure		S								T	T							T							.																G	G	G							T	T																.	.	.	.	.	.	.		T
Template Predicted Secondary structure																									.																																										.	.	.	.	.	.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.		.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.								.	680	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	R	L	Q	W	G	L	K	V	M	A	E	R	M	I	K	C	L	P	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	K	D	G	S	N	I	V	E	A	V	L	H	L	A	R	E	V	K	K	R
Template Known Secondary structure			T	T	T		T	T														T
Template Predicted Secondary structure
Template SS confidence
		690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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