Job Description P75678 Confidence 98.24% Date Thu Jan 5 12:12:57 GMT 2012 Rank 279 Aligned Residues 150 % Identity 19% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.													.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		N	S	E	G	L	K	S	F	Q	Q	S	L	.	.	.	.	.	.	.	.	.	.	.	.	A	D	L	P	Q	W	V	S	E	R	L	L	Q	Q	I	N	Q	L	T	N	Y	E	P	.	.	.	.	.	.	V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	.	.	.	.	.	.	A
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	K	I	T	V	R	I	V	E	R	L	R	E	D	I	M	S	G	K	L	K	S	G	S	E	I	K	D	A	L	K	E	S	V	L	E	M	L	A	K	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G
Template Known Secondary structure																			T	T	S			S																					S					S	S	S	S									T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		59	60	.	.	.	.	.	.	.	.	.												70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.																				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	I	S	P	V	S	D	V	A	A	.	.	.	.	.	.	.	.	.	.	.	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y
Query Conservation													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	G	D	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C
Template Known Secondary structure												S																T							S	S	S	S																	T	T		S										S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		109	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		R	E	Q	L	.	.	.	.	.	P	R	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	Y	R	H	K	V	L	F	V	I	S	Q	S	D
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.																	.																	.	.	.
Template Conservation																											.																	.	.	.
Template Sequence		K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	.	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	T	.	.	.	G	L	I	L	T	K	L	D
Template Known Secondary structure									S	T	T			S								G	G	G	G	G	.	G	G											T				.	.	.						S		T
Template Predicted Secondary structure																											.																	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions