Job Description P75678 Confidence 99.10% Date Thu Jan 5 12:12:57 GMT 2012 Rank 204 Aligned Residues 157 % Identity 15% Template c2nzjB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:gtp-binding protein rem 1; PDBTitle: the crystal structure of rem1 in complex with gdp Resolution 2.50 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	R	Y	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	V	V	L	L	G	D	P	G	V	G	K	T	S	L	A	S	L	F	A	G	K	Q	E	R	D	L	H	E	Q	L	G	E	D	V	Y	E	R	T	L	T	V	D	G	E	D	T	T	L	V	V	V	D	T	W	E	S	.	.	.	.	.	.	.	.	.	.	.	W	S	Q	E	S	C	L	Q	G	G	S
Template Known Secondary structure										T	T	S	S														S			T	T	S	S	S	S	S									T	T														.	.	.	.	.	.	.	.	.	.	.						T	T	T	S		S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.												.	140	.	.	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	Y	R	H	K	V	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V	S
Query Conservation
Alig confidence												.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	V	I	V	Y	S	I	A	D	.	.	R	G	S	F	E	S	A	S	E	L	R	I	Q	L	R	R	T	V	P	I	I	L	V	G	N	K	A	D	L	A	R	C	R	E	V	S	V	E	E	G	R	A	C	A	V	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	D	C	K	F	I	E	T	S
Template Known Secondary structure									T	T		.	.																											T	T		G	G	G			S													.	.	.	.	.	.	.	.	.	.	.	.	.	T							B
Template Predicted Secondary structure												.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.														.	.	.	.	.	.	.	220
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	L	Q	W	G	L	K	V	M	A	E	R	M	I	K	C	L	P	R	E	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	L	Q	H	N	V	A	E	L	F	E	G	V	V	R	Q	L	R	L	R	R	R
Template Known Secondary structure		T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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