Job Description P75678 Confidence 99.61% Date Thu Jan 5 12:12:57 GMT 2012 Rank 96 Aligned Residues 183 % Identity 16% Template c2hf9A_ PDB info PDB header:hydrolase, metal binding protein Chain: A: PDB Molecule:probable hydrogenase nickel incorporation PDBTitle: crystal structure of hypb from methanocaldococcus2 jannaschii in the triphosphate form Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.
Query SS confidence																																															.	.	.	.	.
Query Sequence		L	A	D	L	P	Q	W	V	S	E	R	L	L	Q	Q	I	N	Q	L	T	N	Y	E	P	V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	.	.	.	.	.	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	R	Y	I	T	L
Query Conservation																																															.	.	.	.	.
Alig confidence						.														.	.																										.	.	.	.	.																				.	.
Template Conservation						.														.	.																																																		.	.
Template Sequence		L	K	A	N	.	K	R	L	A	D	K	N	R	K	L	L	N	K	.	.	H	G	V	V	A	F	D	F	M	G	A	I	G	S	G	K	T	L	L	I	E	K	L	I	D	N	L	K	D	K	Y	K	I	A	C	I	A	G	D	V	I	A	K	F	D	A	E	R	M	.	.	E	K	H	G	A	K	V	V	P
Template Known Secondary structure						.														.	.	T	T									S	T	T	S	S													T	T	T										T	T	T								.	.		T	T	T
Template Predicted Secondary structure						.														.	.																																																		.	.
Template SS confidence
		14	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	Y	R	H	K	V
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.
Template Sequence		L	N	T	G	K	E	C	H	L	D	A	H	L	V	G	H	A	L	E	D	L	N	L	D	E	I	D	L	L	F	I	E	N	V	G	N	L	I	C	P	A	D	F	D	L	G	T	H	K	R	I	V	V	I	S	T	T	E	G	D	D	T	I	E	K	H	P	G	I	M	.	.	.	.	.	.	K	T	A	D
Template Known Secondary structure					T	T		S	S											T	T	S		G	G	G		S								S		S	S	G	G	G	G				S		S								G	G	G		T	T	T	T	T	T						.	.	.	.	.	.	T	T		S
Template Predicted Secondary structure																																																																								.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.							.	160	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V	S	V	R	L	Q	W	G	L	K	V	M	A	E	R	M	I	K	C	L	P	R	E	A
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	V	I	N	K	I	D	L	A	.	.	.	.	.	.	.	.	.	.	.	D	A	V	G	A	D	I	K	K	M	E	N	D	A	K	R	I	N	P	D	A	E	V	V	L	L	S	L	K	T	M	E	G	F	D	K	V	L	E	F	I	E	K	S	V	K	E	V	K
Template Known Secondary structure								G	G	G		.	.	.	.	.	.	.	.	.	.	.				T															T	T	S							T	T	T		T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.												.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions