Job Description P75678 Confidence 98.91% Date Thu Jan 5 12:12:57 GMT 2012 Rank 247 Aligned Residues 159 % Identity 13% Template c2f9lA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rab11b, member ras oncogene family; PDBTitle: 3d structure of inactive human rab11b gtpase Resolution 1.55 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	E	P	V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	R	Y	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P
Query Conservation
Alig confidence																														.	.	.	.																																					.	.	.	.	.
Template Conservation																														.	.	.	.																																					.	.	.	.	.
Template Sequence		D	Y	L	F	K	V	V	L	I	G	D	S	G	V	G	K	S	N	L	L	S	R	F	T	R	N	E	F	.	.	.	.	N	L	S	T	I	G	V	E	F	A	T	R	S	I	Q	V	D	G	K	T	I	K	A	Q	I	W	D	T	A	G	Q	E	R	Y	R	R	.	.	.	.	.	I	T	S	A	Y	Y	R
Template Known Secondary structure		S									S	S	T	T	S	S											S			.	.	.	.						S											T	T											S	S	G	G	G	T	T		.	.	.	.	.							T
Template Predicted Secondary structure																														.	.	.	.																																					.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		R	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	Y	R	.	.	H	K	V	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P
Query Conservation																																		.	.
Alig confidence																																		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	V	G	A	L	L	V	Y	D	I	A	K	H	L	T	Y	E	N	V	E	R	W	L	K	E	L	R	D	H	A	D	S	N	I	V	I	M	L	V	G	N	K	S	D	L	R	H	L	R	A	V	P	T	D	E	A	R	A	F	A	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	L	S
Template Known Secondary structure		T		S								T	T							T												S		T	T										T	T		G	G	G			S												.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.														.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	A	V	S	V	R	L	Q	W	G	L	K	V	M	A	E	R	M	I	K	C	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	E	T	S	A	L	D	S	T	N	V	E	E	A	F	K	N	I	L	T	E	I
Template Known Secondary structure							T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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