Job Description P75678 Confidence 99.69% Date Thu Jan 5 12:12:57 GMT 2012 Rank 73 Aligned Residues 165 % Identity 11% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	R	Y	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D	L
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		N	V	A	I	I	G	T	E	K	S	G	R	T	S	L	A	A	N	L	G	.	.	.	.	.	.	.	.	.	K	K	G	T	S	S	D	I	T	X	Y	N	N	D	K	E	G	R	N	X	V	F	V	D	A	H	S	Y	.	.	.	.	.	.	.	P	K	T	L	K	S	L	I	T	A	L	N	I	S	D	I
Template Known Secondary structure								S	T	T	S	S							T	T	S	.	.	.	.	.	.	.	.	.						S	S	S							S	S	S	S								T	T	T	.	.	.	.	.	.	.	T	T											T		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.										.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	Y	R	H	K	V	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V	S	V
Query Conservation
Alig confidence									.													.																							.	.	.	.	.	.	.	.
Template Conservation									.													.																							.	.	.	.	.	.	.	.
Template Sequence		A	V	L	C	I	P	P	.	Q	G	L	D	A	H	T	G	E	C	I	I	.	A	L	D	L	L	G	F	K	H	G	I	I	A	L	T	R	S	D	S	T	H	X	.	.	.	.	.	.	.	.	H	A	I	D	E	L	K	A	K	L	K	V	I	T	S	G	T	V	L	Q	D	W	E	C	I	S	L	N	T
Template Known Secondary structure								T	.	T												.					T	T											G	G	G	S			.	.	.	.	.	.	.	.														T	T	T	S	T	T	T	T
Template Predicted Secondary structure									.													.																							.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		198	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		R	L	Q	.	.	.	.	.	W	G	L	K	V	M	A	E	R	M	I	K	C	L	P	R	E	A	T	S	P	V	V	S	Q	L	H	P
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.
Template Conservation
Template Sequence		N	K	S	A	K	N	P	F	E	G	V	D	E	L	K	A	R	I	N	E	V	A	E	K	I	E	A	E	N	A	E	L	N	S	L	P
Template Known Secondary structure			T	T	S	S	S	T	T	T	T																						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions