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Job DescriptionP75678
Confidence97.99%DateThu Jan 5 12:12:57 GMT 2012
Rank287Aligned Residues173
% Identity12%Templatec2bcjQ_
PDB info PDB header:transferase/hydrolaseChain: Q: PDB Molecule:g alpha i1, guanine nucleotide-binding protein g(q), alpha PDBTitle: crystal structure of g protein-coupled receptor kinase 2 in complex2 with galpha-q and gbetagamma subunits
Resolution3.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.. .......60.........70
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Query Sequence  YEPVIGIMGKTGVGKSSL. . . CNALFAGDISPVSDVAAC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVD
Template Known Secondary structure 
STTSSTSS


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SSTTTS
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   38.40.........50.........60.........70.........80.........90.........100.........110.......
 
   71........80..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TREPLRFRLQVG
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Template Sequence  VEKVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPSYLPTQQDVLRVRVPTTGIIEYPFDLQ
Template Known Secondary structure  STT




STTTSS


TTTTTSTT









S

S
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   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   83......90.........100.........110.........120......... 130.........140.. .......
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Query Sequence  DRYITLMDLPGVGESGARDTEYAALYREQLPRLDLVLWLIKADDRAL. . . . . . . . . . . TVDEHFYHQVIGE. . VYRHKVL
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Template Sequence  SVIFRMVDVGGQRSERR. . . . . . . KWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVI
Template Known Secondary structure  S



STTGGG.......GGGGG
SS
SGGGGG
B
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TTSB
GGGSSS
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   198.200.........210.... .....220.........230.........240.........250.........260.........270
 
   150.........160. ........170.........180.........190.........200.........210....
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Query Sequence  FVISQSDKAEPT. . . . . . . . . . . . . SGGGQLSTAQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLKVMAERMIKCL
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Template Sequence  LFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI
Template Known Secondary structure 
TTTS
STT

S
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   271........280.........290.........300.........310.........320.........330.........340........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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