Job Description P75678 Confidence 98.96% Date Thu Jan 5 12:12:57 GMT 2012 Rank 240 Aligned Residues 155 % Identity 12% Template c1z06A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ras-related protein rab-33b; PDBTitle: gppnhp-bound rab33 gtpase Resolution 1.81 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	R	Y	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D	L
Query Conservation
Alig confidence																												.																														.	.	.	.
Template Conservation																												.																														.	.	.	.
Template Sequence		K	I	I	V	I	G	D	S	N	V	G	K	T	C	L	T	Y	R	F	C	A	G	R	F	P	D	.	R	T	E	A	T	I	G	V	D	F	R	E	R	A	V	D	I	D	G	E	R	I	K	I	Q	L	W	D	T	.	.	.	.	A	G	Q	E	R	F	R	K	S	M	V	Q	H	Y	Y	R	N	V	H	A
Template Known Secondary structure									T	T	S	S											S	S			S	.	S						S											T	T											.	.	.	.			S					T	T	T						T	T
Template Predicted Secondary structure																												.																														.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	.	.	.	E	V	Y	R	H	K	V	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A
Query Conservation																										.	.	.
Alig confidence																										.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	F	V	Y	D	M	T	N	M	A	S	F	H	S	L	P	A	W	I	E	E	C	K	Q	H	L	L	A	N	D	I	P	R	I	L	V	G	N	K	C	D	L	R	S	A	I	Q	V	P	T	D	L	A	Q	K	F	A	D	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	P	L	F	E
Template Known Secondary structure								T	T							T															S											T	T		G	G	G			S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170														.	.	.	.	.	.
		195	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		V	S	V	R	L	Q	W	.	.	.	G	L	K	V	M	A	E	R	M
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		T	S	A	K	N	P	N	D	N	D	H	V	E	A	I	F	M	T	L
Template Known Secondary structure				S	S	S	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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