Job Description P75678 Confidence 99.89% Date Thu Jan 5 12:12:57 GMT 2012 Rank 13 Aligned Residues 178 % Identity 16% Template c1mkyA_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:probable gtp-binding protein enga; PDBTitle: structural analysis of the domain interactions in der, a2 switch protein containing two gtpase domains Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	Y	E	P	V	I	G	I	M	G	K	T	G	V	G	K	S	S	L	C	N	A	L	F	A	G	D	I	S	P	V	S	D	V	A	A	C	T	R	E	P	L	R	F	R	L	Q	V	G	D	R	Y	I	T	L	M	D	L	P	G	V	G	E	S	G	A	R	D	T	E	Y	A	A	L	Y	R	E	Q	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		I	T	D	A	I	K	V	A	I	V	G	R	P	N	V	G	K	S	T	L	F	N	A	I	L	N	K	E	R	A	L	V	S	P	I	P	V	D	D	E	.	.	.	.	.	.	V	F	I	D	G	R	K	Y	V	F	V	D	T	A	G	L	E	K	Y	S	N	.	.	.	.	.	.	Y	R	V	V	D	S	I
Template Known Secondary structure				S									S	T	T	S	S										T	S	T	T												.	.	.	.	.	.				T	T						S	S		S					S			.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.							.	.	240	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	L	D	L	V	L	W	L	I	K	A	D	D	R	A	L	T	V	D	E	H	F	Y	H	Q	V	I	G	E	V	Y	R	H	K	V	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	G	Q	L	S	T	A	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V
Query Conservation
Alig confidence																																.	.																																.	.	.	.	.	.	.	.
Template Conservation																																.	.																																.	.	.	.	.	.	.	.
Template Sequence		E	K	A	D	V	V	V	I	V	L	D	A	T	Q	G	I	T	R	Q	D	Q	R	X	A	G	L	X	E	R	R	.	.	G	R	A	S	V	V	V	F	N	K	W	D	L	V	V	H	R	E	K	R	Y	D	E	F	T	K	L	F	R	E	K	.	.	.	.	.	.	.	.	L	Y	F	I	D	Y	S	P	L
Template Known Secondary structure					S								T	T	T																T	.	.	T										G	G	G	S	T	T	G	G	G													.	.	.	.	.	.	.	.		G	G	G	T	T	S
Template Predicted Secondary structure																																.	.																																.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.									.	.	.	.	.	.	.	330	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	V	S	V	R	L	Q	W	G	L	K	V	M	A	E	R	M	I	K	C	L	P	R	E	A	T	S	P	V	V	S	Q	L	H	P	S	F	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	T	S	A	D	K	G	W	N	I	D	R	X	I	D	A	X	N	L	A	Y	A	S	Y	T	T	K	V	P	S	S	A	I	N	S	A	L	Q	K
Template Known Secondary structure					B	T	T	T	T	B	S																T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions