|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
L | V | D | M | R | D | V | S | F | T | R | G | N | R | C | I | F | D | N | I | S | L | T | V | P | R | G | K | I | T | A | I | M | G | P | S | G | I | G | K | T | T | L | L | R | L | I | G | G | Q | I | A | P | D | H | G | E | I | L | F | D | G | E | N | I | P | A | M | S | R | S | R | L | Y | T | V | R | K | R | M |
Query Conservation |   |
  |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
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|   |   |
|   |   |
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|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
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| . | . | . | . |
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| . |
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| . | . | . |
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Template Conservation |   |
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|   |   |   |
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|   |   |   |   | . | . | . | . |   |
|   |   |
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|   |   |
|   |   |
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|   |   |   |
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|   |   |
|   |
|   |   | . |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |
Template Sequence |   |
V | X | Q | L | Q | D | V | A | E | S | T | . |
. |
. |
. |
R | L | G | P | L | S | G | E | V | R | A | G | E | I | L | H | L | V | G | P | N | G | A | G | K | S | T | L | L | A | R | X | A | G | X | T | . |
S | G | K | G | S | I | Q | F | A | G | Q | P | L | E | A | W | S | A | T | K | L | A | L | H | . |
. |
. |
R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| T | T | . | . | . | . | T | S |
| S |  |  |  |  |  |  | T | T |
|  |  |  |
| B |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  | T | S |
| . |
|
| S | S |  |  |  |  | S | S | S | B | G | G | G | S |
|  |  |  |  |  |  |  | . | . | . |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  | . | . | . | . |  |  |  |
|
|  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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| . |
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|  |  |  |  |  |  |  |  |
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|  |  |  |
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| . | . | . |
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Template SS confidence |   |
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  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | |
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. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
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. |
  |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
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Predicted Secondary structure |   |
 |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
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| . | . | . | . | . | . |
Query SS confidence |   |
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| . |
. |
. |
. |
. |
. |
Query Sequence |   |
S | M | L | F | Q | S | G | A | L | F | T | D | M | N | V | F | D | N | V | A | Y | P | L | R | E | H | T | Q | L | P | A | P | L | L | H | S | T | V | M | M | K | L | E | A | V | G | L | R | G | A | A | K | L | M | P | S | E | L | S | G | G | M | A | R | R | A | A | L | A | R | A | I | A | L | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
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|   |
|   |   |   |
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|   |
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|   |
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|   |   | . | . | . | . | . | . |
Alig confidence |   |
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| . | . | . | . | . | . |
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| . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | Y | L | S | Q | Q | Q | T | P | P | F | A | T | P | V | W | H | Y | L | T | L | H | . |
. |
. |
. |
. |
. |
Q | H | D | K | T | R | T | E | L | L | N | D | V | A | G | A | L | A | L | D | D | K | L | G | R | S | T | N | Q | L | S | G | G | E | W | Q | R | V | R | L | A | A | V | V | L | Q | I | T | P | Q | A | N |
Template Known Secondary structure |   |
 |  |  |
| S |
|
|
|
|
| S | S |
| B |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
| S |
| T | T |
|  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T | T | T | S | B | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
|
Template Predicted Secondary structure |   |
|
|
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|
|  |  |  |  |
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|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
|
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  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |
|
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
. |
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Query Sequence |   |
. |
E | P | D | L | I | M | F | D | E | P | F | V | G | Q | D | P | I | T | M | G | V | L | V | K | L | I | S | E | L | N | S | A | L | G | V | T | C | V | V | V | S | H | D | V | P | E | V | L | S | I | A | D | H | A | W | I | L | A | D | K | K | I | V | A | H | G | S | A | Q | A | L | Q | A | N | P | D |
Query Conservation |   |
. |   |
|   |
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|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
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|   |
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|   |   |   |   |
|   |   |   |   |
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|   |
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|   |   |
|   |
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|   |   |
|   |   |   |
|
|   |   |   |   |   |
Alig confidence |   |
. |
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| . |
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Template Conservation |   |
  |   |
|   |
|
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|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   | . |   |   |
|
|
|   |
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|
|   |   |   |   |
|   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
P | A | G | Q | L | L | L | L | D | E | P | X | N | S | L | D | V | A | Q | Q | S | A | L | D | K | I | L | S | A | L | C | Q | Q | . |
G | L | A | I | V | X | S | S | H | D | L | N | H | T | L | R | H | A | H | R | A | W | L | L | K | G | G | K | X | L | A | S | G | R | R | E | E | V | L | T | P | P | N |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  | S | S |
| S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| S | B |
|
| B |  |  | T | T |  |  |
|
|
| S | B |  |  |  |  | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |
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|  |  |
Template SS confidence |   |
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  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |