Job Description P63386 Confidence 100.00% Date Thu Jan 5 12:08:06 GMT 2012 Rank 58 Aligned Residues 217 % Identity 27% Template c3pihA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:uvrabc system protein a; PDBTitle: t. maritima uvra in complex with fluorescein-modified dna Resolution 2.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																														.																																														.	.	.	.	.	.
Query SS confidence																														.																																														.	.	.	.	.	.
Query Sequence		F	D	N	I	S	L	T	V	P	R	G	K	I	T	A	I	M	G	P	S	G	I	G	K	T	T	L	L	.	R	L	I	G	G	Q	I	A	P	D	H	G	E	I	L	F	D	G	E	N	I	P	A	M	S	R	S	R	L	Y	T	V	R	K	R	M	S	M	L	F	Q	S	G	A	L	.	.	.	.	.	.
Query Conservation																														.																																														.	.	.	.	.	.
Alig confidence																														.																														.	.	.														.	.	.	.	.	.
Template Conservation																																																												.	.	.
Template Sequence		L	K	N	I	D	V	E	I	P	L	G	V	F	V	C	V	T	G	V	S	G	S	G	K	S	S	L	V	M	E	T	L	Y	P	A	L	M	N	L	L	H	K	T	K	L	P	A	G	E	F	D	S	I	E	G	H	E	N	.	.	.	I	D	K	M	I	A	I	D	Q	S	P	I	G	R	T	P	R	S	N
Template Known Secondary structure				S							S	S	S							S	T	T	S	S								T																				S					G	G	G	.	.	.									S							T	T
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.				.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
																																																																																	97
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	T	Y	T	K	V	F	D	E	I	R	S	L	F	A	M	T	P	A	A	K	A	R	G	Y	N	K	S	R	F	S	F	N	L	K	G	G	R	C	E	A	C	Q	G	Q	G	Y	V	K	I	E	M	L	F	L	P	D	V	Y	V	E	C	D	V	C	K	G	K	R	Y	N	R	E	T	L	E	I	T	Y
Template Known Secondary structure						S	S										T	T	S						S	S			G	G	G	G		T	T	S	T	T	T	B		T	T	T	T	T	S	S							T	T	S								T	T	T	T	T	S		B		T	T	G	G	G			B
Template Predicted Secondary structure
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.
Predicted Secondary structure																											.																	.																											.	.	.
Query SS confidence																											.																	.																											.	.	.
Query Sequence		T	D	M	N	V	F	D	N	V	A	Y	P	L	R	E	H	T	Q	L	P	A	P	L	L	H	.	S	T	V	M	M	K	L	E	A	V	G	L	R	G	A	A	.	K	L	M	P	S	E	L	S	G	G	M	A	R	R	A	A	L	A	R	A	I	A	L	E	P	D	.	.	.	L	I	M	F	D	E	P	F
Query Conservation																											.																	.																											.	.	.
Alig confidence																											.																	.																											.	.	.
Template Conservation
Template Sequence		K	G	K	N	I	S	D	I	L	D	M	T	V	D	E	A	L	E	F	F	K	N	I	P	S	I	K	R	T	L	Q	V	L	H	D	V	G	L	G	Y	V	K	L	G	Q	P	A	T	T	L	S	G	G	E	A	Q	R	I	K	L	A	S	E	L	R	K	R	D	T	G	R	T	L	Y	I	L	D	E	P	T
Template Known Secondary structure		T	T	B							S	S	B								T	T	T														T	T	G	G	G	S	B	T	T			S	T	T																T	S				S	S							S	T	T
Template Predicted Secondary structure
Template SS confidence
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.
Query Sequence		V	G	Q	D	P	I	T	M	G	V	L	V	K	L	I	S	E	L	N	S	A	L	G	V	T	C	V	V	V	S	H	D	V	P	E	V	L	S	I	A	D	H	A	W	I	L	.	.	.	.	.	.	A	D	K	K	I	V	A	H	G	S	A	Q	A	L	Q	A	N	P	D	P	R	V	R	Q	F	L	D
Query Conservation																																																.	.	.	.	.	.
Alig confidence																							.																	.								.	.	.	.	.	.
Template Conservation																							.																	.
Template Sequence		V	G	L	H	F	E	D	V	R	K	L	V	E	V	L	H	R	L	V	D	R	.	G	N	T	V	I	V	I	E	H	N	L	D	V	I	K	N	.	A	D	H	I	I	D	L	G	P	E	G	G	K	E	G	G	Y	I	V	A	T	G	T	P	E	E	I	A	K	N	P	H	S	Y	T	G	R	F	L	K
Template Known Secondary structure		T	T																			T	.	T														T	T	.		S							S	S	S	G	G	G									S						S		T	T								T
Template Predicted Secondary structure																							.																	.
Template SS confidence
		837	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.		.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.		.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions