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Job DescriptionP63386
Confidence100.00%DateThu Jan 5 12:08:06 GMT 2012
Rank28Aligned Residues236
% Identity25%Templatec3nhaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYT
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Template Sequence  RFQKGRIEFENVHFSYADRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASL. .
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   584.....590.........600.........610.........620.........630.........640.........650.........660.
 
   83......90.........100.........110.........120.........130.........140... ......150........
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Query Sequence  VRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPS. . . . ELSGGMARRAALARA
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Template Sequence  . RSHIGVVPQDTVLFND. TIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIART
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   663......670........ .680.........690.........700.........710.........720.........730.........740
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  IALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDP
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Template Sequence  ILKAPGIILLDEATSALDTSNERAIQASLAKVCA. . NRTTIVVAHRLSTVV. NADQILVIKDGCIVERGRHEALLSR. GG
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   741........750.........760.........770.... .....780......... 790.........800.........810.... ..
 
   239240......
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Query Sequence  RVRQFLDG
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Template Sequence  VYADMWQL
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   817..820....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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