Job Description P63386 Confidence 99.81% Date Thu Jan 5 12:08:06 GMT 2012 Rank 64 Aligned Residues 191 % Identity 11% Template c3a4mB_ PDB info PDB header:transferase Chain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase Resolution 1.79 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	A	I	M	G	P	S	G	I	G	K	T	T	L	L	R	L	I	G	G	Q	I	A	P	D	H	G	E	I	L	F	D	G	E	N	I	P	A	M	S	R	S	R	L	Y	T	V	R	K	R	M	S	M	L	F	Q	S	G	A	L	F	T	D	M	N	V	F	D	N	V	A	Y	P	L	R	E	H	T	Q
Query Conservation
Alig confidence																																																							.	.
Template Conservation																																																							.	.
Template Sequence		L	I	I	L	T	G	L	P	G	V	G	K	S	T	F	S	K	N	L	A	K	I	L	S	K	N	N	I	D	V	I	V	L	G	S	D	L	I	R	E	S	F	P	V	W	K	E	K	Y	E	E	F	I	.	.	K	K	S	T	Y	R	L	I	D	S	A	L	K	N	Y	W	V	I	V	D	D	T	N	Y	Y
Template Known Secondary structure									T	T	S	S															T	T								T					T	T	S	S	S			T	T						.	.													T	T	S						S				S
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.
Query Sequence		L	P	A	P	L	L	H	S	T	V	M	M	K	L	E	A	V	G	L	R	G	A	A	K	L	M	P	S	E	L	S	G	G	M	A	R	R	.	.	.	.	.	.	.	.	.	A	A	L	A	R	A	I	A	L	E	P	D	L	I	M	F	D	E	P	F	V	G	Q	D	P	I	T	M	G	V	L	V	K	L
Query Conservation																																							.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	M	R	R	D	L	I	N	I	A	K	K	Y	N	K	N	Y	A	I	I	Y	L	K	A	S	L	D	V	L	I	R	R	N	I	E	R	G	E	K	I	P	N	E	V	I	K	K	M	Y	E	K	F	D	E	P	G	K	K	Y	K	W	D	E	P	F	L	I	I	D	T	T	K	D	I	D	F	N	E	I
Template Known Secondary structure															T	T																						T	T		S	S															T	T	S	S		G	G	G			S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		I	S	E	L	N	S	A	L	G	V	T	C	V	V	V	S	H	D	V	P	E	V	L	S	I	A	D	H	A	W	.	.	I	L	A	D	K	K	I	V	A	H	G	S	A	Q
Query Conservation																																.	.
Alig confidence									.	.																						.	.
Template Conservation									.	.
Template Sequence		A	K	K	L	I	E	K	.	.	S	K	E	I	P	K	F	N	I	S	D	K	I	D	K	E	T	R	K	I	V	S	E	Y	I	K	S	K	K	L	D	K	D	K	I	K	E
Template Known Secondary structure									.	.		T	S																									T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		164	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions