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Job DescriptionP63386
Confidence96.77%DateThu Jan 5 12:08:06 GMT 2012
Rank215Aligned Residues172
% Identity11%Templatec2iusB_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:dna translocase ftsk; PDBTitle: e. coli ftsk motor domain
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.. .......70.........80.........90.........100..
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Query Sequence  DNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDH. . GEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
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Template Sequence  EPVVADLAKMPHLLVAGTTGSGASVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDM. . KDAANA
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GGGS
S

TTSSTT

TTT
TTSSSSGGGTT
TTBSSS
B
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   975....980.........990.........1000.........1010.........1020.........1030.........1040...... ...1050..
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGV
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Template Sequence  LRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDP. . . . . . . . YWHPVLKKEPYIVVLVDEFADLMMTVGKK
Template Known Secondary structure  TT
SSTT


B
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   1053......1060.........1070.........1080.........1090..... ....1100.........1110.........1120....
 
   183......190... ......200......
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Query Sequence  LVKLISELNSA. . . LGVTCVVVSHDVP
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Template Sequence  VEELIARLAQKARAAGIHLVLATQRPS
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   1134.....1140.........1150.........1160
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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