Job Description P63386 Confidence 100.00% Date Thu Jan 5 12:08:06 GMT 2012 Rank 47 Aligned Residues 221 % Identity 24% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	S	V	A	N	L	V	D	M	R	D	V	S	F	T	R	G	N	R	C	I	F	D	N	I	S	L	T	V	P	R	G	K	I	T	A	I	M	G	P	S	G	I	G	K	T	T	L	L	R	L	I	G	G	Q	I	A	P	D	H	G	E	I	L	F	D	G	E	N	I	P	A	M	S	R	S	R	L	Y
Query Conservation
Alig confidence																					.	.																																								.																			.
Template Conservation																					.	.																																								.																			.
Template Sequence		E	K	K	F	G	V	N	I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	.
Template Known Secondary structure			T	T	T																.	.	S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S						.
Template Predicted Secondary structure																					.	.																																								.																			.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	R	K	R	M	S	M	L	F	Q	S	G	A	L	F	T	D	M	N	V	F	D	N	V	A	Y	P	L	R	E	H	T	Q	L	P	A	P	L	L	H	S	T	V	M	M	K	L	E	A	V	G	L	R	G	A	A	K	L	M	P	S	E	L	S	G	G	M	A	R	R	A	A	L	A	R	A	I	A	L
Query Conservation
Alig confidence		.	.																	.												.	.
Template Conservation		.	.																	.												.	.
Template Sequence		.	.	R	S	I	I	G	I	V	P	Q	D	T	I	L	F	N	E	.	T	I	K	Y	N	I	L	Y	G	K	L	.	.	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K
Template Known Secondary structure		.	.		T	T						S	S					S	S	.	B							T	T	S	T	.	.	T													T	T								S	T	T	G	G	G		B																		T
Template Predicted Secondary structure		.	.																	.												.	.
Template SS confidence
				92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	D	L	I	M	F	D	E	P	F	V	G	Q	D	P	I	T	M	G	V	L	V	K	L	I	S	E	L	N	S	A	L	G	V	T	C	V	V	V	S	H	D	V	P	E	V	L	S	I	A	D	H	A	W	I	L	A	D	K	K	I	V	A	H	G	S	A	Q	A	L	Q	A	N	P	D	P	R	V	R
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.								.															.
Template Conservation																	.	.	.	.	.	.	.	.	.	.								.															.
Template Sequence		D	P	K	I	V	I	F	D	D	S	K	T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	N	G	E	Y	A	E
Template Known Secondary structure				S													.	.	.	.	.	.	.	.	.	.								.									S	S	G	G	G	S	.	T	T		S							T	T															T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.								.															.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		242	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions