Job Description P63386 Confidence 100.00% Date Thu Jan 5 12:08:06 GMT 2012 Rank 13 Aligned Residues 249 % Identity 28% Template c1vciA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp Resolution 2.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	N	L	V	D	M	R	D	V	S	F	T	R	G	N	R	C	I	F	D	N	I	S	L	T	V	P	R	G	K	I	T	A	I	M	G	P	S	G	I	G	K	T	T	L	L	R	L	I	G	G	Q	I	A	P	D	H	G	E	I	L	F	D	G	E	N	I	P	A	M	S	R	S	R	L	Y	T	V
Query Conservation
Alig confidence						.																																																																								.	.	.	.
Template Conservation						.																																																																								.	.	.	.
Template Sequence		K	M	V	E	.	V	K	L	E	N	L	T	K	R	F	G	N	F	T	A	V	N	K	L	N	L	T	I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	M	I	A	G	L	E	E	P	T	E	G	R	I	Y	F	G	D	R	D	V	T	Y	L	P	P	K	D	.	.	.	.
Template Known Secondary structure						.											T	T													T	T									T	T	S	S										T	S	S			S							T	T				T	T	S		G	G	G	.	.	.	.
Template Predicted Secondary structure						.																																																																								.	.	.	.
Template SS confidence
		9	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	R	M	S	M	L	F	Q	S	G	A	L	F	T	D	M	N	V	F	D	N	V	A	Y	P	L	R	E	H	T	Q	L	P	A	P	L	L	H	S	T	V	M	M	K	L	E	A	V	G	L	R	G	A	A	K	L	M	P	S	E	L	S	G	G	M	A	R	R	A	A	L	A	R	A	I	A	L	E	P
Query Conservation
Alig confidence		.									.	.	.	.	.	.														.	.	.
Template Conservation		.									.	.	.	.	.	.														.	.	.
Template Sequence		.	R	N	I	S	M	V	F	Q	.	.	.	.	.	.	H	M	T	V	Y	E	N	I	A	F	P	L	K	.	.	.	K	F	P	K	D	E	I	D	K	R	V	R	W	A	A	E	L	L	Q	I	E	E	L	L	N	R	Y	P	A	Q	L	S	G	G	Q	R	Q	R	V	A	V	A	R	A	I	V	V	E	P
Template Known Secondary structure		.	T	T							.	.	.	.	.	.										T	T			.	.	.																		T	T		G	G	G	T	T			G	G	G			S	S												T	T
Template Predicted Secondary structure		.									.	.	.	.	.	.														.	.	.
Template SS confidence
			84	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		D	L	I	M	F	D	E	P	F	V	G	Q	D	P	I	T	M	G	V	L	V	K	L	I	S	E	L	N	S	A	L	G	V	T	C	V	V	V	S	H	D	V	P	E	V	L	S	I	A	D	H	A	W	I	L	A	D	K	K	I	V	A	H	G	S	A	Q	A	L	Q	A	N	P	.	D	P	R	V	R	Q
Query Conservation																																																																											.
Alig confidence																																																																											.
Template Conservation
Template Sequence		D	V	L	L	M	D	E	P	L	S	N	L	D	A	K	L	R	V	A	M	R	A	E	I	K	K	L	Q	Q	K	L	K	V	T	T	I	Y	V	T	H	D	Q	V	E	A	M	T	M	G	D	R	I	A	V	M	N	R	G	Q	L	L	Q	I	G	S	P	T	E	V	Y	L	R	P	N	S	V	F	V	A	T
Template Known Secondary structure		S						S	T	T	T	T	S																												S										S							T	T														S		S	B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	D	G	I	A	D	G	P	V	P	F	R	Y	P	A	G	D	Y	H	A	D	L	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	G	A	P	E	M	N	I	L	E	V	S	V	G	D	G	Y	L	E	G	R	G	F	R
Template Known Secondary structure			S	S	S	S											S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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