Job Description P63386 Confidence 97.00% Date Thu Jan 5 12:08:06 GMT 2012 Rank 177 Aligned Residues 153 % Identity 13% Template c1lw7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcriptional regulator nadr; PDBTitle: nadr protein from haemophilus influenzae Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	I	M	G	P	S	G	I	G	K	T	T	L	L	R	L	I	G	G	Q	I	A	P	D	H	G	E	I	L	F	D	G	E	N	I	P	A	M	S	R	S	R	L	Y	T	V	R	K	R	M	S	M	L	F	Q	S	G	A	L	F	T	D	M	N	V	F	D	N	V	A	Y	P	L	R	E	H	T	Q	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	I	L	G	G	E	S	S	G	K	S	V	L	V	N	K	L	A	A	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	T	S	A	W	E	Y	G	R	E	F	V	F	E	K	L	G	G	D	E	Q	A	M	Q	Y	S	D	Y	P	Q	X	A	L	G	H	Q
Template Known Secondary structure								T	T	S													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T							S	S	S	S		T	T	S	S		T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	P	L	L	H	S	T	V	M	M	K	L	E	A	V	G	L	R	G	A	A	K	L	M	P	S	E	L	S	G	G	M	A	R	R	A	A	L	A	R	A	I	A	L	E	P	D	L	I	M	F	D	E	P	F	V	G	Q	D	P	I	T	M	G	V	L	V	K	L	I	S	E	L	N	S	A	L	G	V
Query Conservation
Alig confidence																																																										.	.
Template Conservation																																																										.	.
Template Sequence		R	Y	I	D	Y	A	V	R	H	S	H	K	I	A	F	I	D	T	D	F	I	T	T	Q	A	F	C	I	Q	Y	E	G	K	A	H	P	F	L	D	S	X	I	K	E	Y	P	F	D	V	T	I	L	L	K	N	N	.	.	T	E	Q	K	Q	R	Q	Q	F	Q	Q	L	L	K	K	L	L	D	K	Y	K	V
Template Known Secondary structure												S	S					S	S														S													S			S									.	.					S														G	G	G
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		197	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		T	C	V	V	V	S	H	.	D	V	P	E	V	L	S	I	A
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		P	Y	I	E	I	E	S	P	S	Y	L	D	R	Y	N	Q	V
Template Known Secondary structure									S	S
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions