 |
Job Description | P75713 | Confidence | 98.75% | Date | Thu Jan 5 12:13:23 GMT 2012 |
Rank | 86 | Aligned Residues | 97 |
% Identity | 10% | Template | d2phla2 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.20 |
|
 |
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | V | I | L | L | D | F | L | P | K | E | L | G | F | D | M | N | M | H | I | L | S | F | A | P | G | A | S | H | G | Y | I | E | T | H | V | Q | E | H | G | A | Y | I | L | S | G | Q | G | V | Y | N | L | D | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | W | I | P | V | K | K | G | D | Y | I | F | M | G | A |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   | . | . |
|   |
|
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|   |
Template Sequence |   |
E | F | G | N | L | T | E | R | T | D | N | S | . |
. |
L | N | V | L | I | S | S | I | E | M | E | E | G | A | L | F | V | P | H | Y | Y | S | K | A | I | V | I | L | V | V | N | E | G | E | A | H | V | E | L | V | G | P | K | G | E | T | L | E | Y | E | S | Y | R | A | E | L | S | K | D | D | V | F | V | I | P | A |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  | T | T | . | . | T | T |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |
|
|
|
| S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | |
|
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . |
  |
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | S | L | Q | A | G | Y | G | V | G | R | G | E | A | F | S | Y | I | Y | S | K | D | C | N | R | D | V | E | I |
Query Conservation |   |
  |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
A | Y | P | V | A | I | K | A | T | S | N | V | N | F | T | G | F | G | I | N | A | N | N | N | N | R | N | L | L |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  | S |
| T | T |
|
|  |  |  | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|