Job Description P75713 Confidence 97.07% Date Thu Jan 5 12:13:23 GMT 2012 Rank 121 Aligned Residues 64 % Identity 22% Template c3uyjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 8; PDBTitle: crystal structure of jmjd5 catalytic core domain in complex with2 nickle and alpha-kg Resolution 2.35 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																																		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	Q	G	T	I	S	P	L	H	Q	D	P	Q	Q	N	F	L	V	Q	V	M	G	R	K	Y	I	R	L	Y	S	P	Q	E	S	G	A	L	Y	P	H	N	T	S	Q	V	D	V	E	N	P	D	L	E	K	F	P	K	F	A	K	A	P	F	L	S	C	I	L	S	P	G	E	I	L	F	I	P	V	K	Y
Template Known Secondary structure			T	T									S	S									S									G	G	G	G	G	G	G		B			B	B	S	S		T	T	S			T	T	T		T	T	S	T	T										T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	T	F	V	N	A	Q	A	E	D	S	Q	I	F	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	H	Y	V	R	A	L	D	L	S	F	S	V	S	F	W	W
Template Known Secondary structure								S	S	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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