Job Description P75713 Confidence 99.53% Date Thu Jan 5 12:13:23 GMT 2012 Rank 46 Aligned Residues 241 % Identity 20% Template c3s7eB_ PDB info PDB header:allergen Chain: B: PDB Molecule:allergen ara h 1, clone p41b; PDBTitle: crystal structure of ara h 1 Resolution 2.71 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	V	T	G	Y	R	E	D	L	L	A	N	R	A	I	V	K	H	G	N	F	A	L	L	T	P	D	G	L	V	K	N	I	I	P	G	F	E	N	C	D	A	T	I	L	S	T	P	K	L	G	A	S	F	V	D	Y	L	V	T	L	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.										.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.										.
Template Sequence		N	N	P	F	Y	F	P	S	R	R	F	S	T	R	Y	G	N	Q	N	G	R	I	R	V	L	Q	R	F	D	Q	R	S	R	Q	F	Q	N	L	Q	N	H	R	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	E	A	K	P	N	T	.	L	V	L	P	K	H	A	D	A	.	D	N	I
Template Known Secondary structure				S	S				G	G	G								T	T									S	T	T	T		G	G	G	G	G	G	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		.								S		.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.										.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.															.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.		.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure														.	.	.	.																														.																													.	.	.	.	.	.
Query SS confidence														.	.	.	.																														.																													.	.	.	.	.	.
Query Sequence		L	Y	V	I	S	G	N	I	T	A	K	A	.	.	.	.	E	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S	L	M	T	F	V	N	A	Q	A	E	.	D	S	Q	I	F	L	Y	K	R	R	Y	V	P	V	E	G	Y	A	P	W	L	V	S	G	N	A	S	E	.	.	.	.	.	.
Query Conservation														.	.	.	.																														.																													.	.	.	.	.	.
Alig confidence														.	.	.	.																														.																													.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	I	Q	Q	G	Q	A	T	V	T	V	A	N	G	N	N	R	K	S	F	N	L	D	E	G	H	A	L	R	I	P	S	G	F	I	S	Y	I	L	N	R	H	D	N	Q	N	L	R	V	A	K	I	S	M	P	V	N	T	P	G	Q	F	E	D	F	F	P	A	S	S	R	D	Q	S	S	Y	L	Q	G
Template Known Secondary structure						S	B									S	S									T	T							T	T										S	S	S		B									S	S	B	T	T	B						S	S			S	S				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
																																																								154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	R	I	H	Y	E	G	M	D	D	V	I	L	L	D	F	L	P	K	E	L	G	F	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		F	S	R	N	T	L	E	A	A	F	N	A	E	F	N	E	I	R	R	V	L	L	E	N	E	G	V	I	V	K	V	S	K	E	H	V	E	E	L	T	K	H	A	K	S	G	D	I	T	N	P	I	N	L	R	E	G	E	P	D	L	S	N	N	F	G	K	L	F	E	V	K	P	D	K	K	N	P	Q	L
Template Known Secondary structure		S										T	S									T	T				S	S															T												T	T		S			S			S	S	S								S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
					178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.	.																																							.	.	.				.	.	.	.	.	.
Query SS confidence		.	.	.																																							.	.	.				.	.	.	.	.	.
Query Sequence		.	.	.	D	M	N	M	H	I	L	S	F	A	P	G	A	S	H	G	Y	I	E	T	H	V	Q	E	H	G	A	Y	I	L	S	G	Q	G	V	Y	N	L	.	.	.	D	N	N	.	.	.	.	.	.	W	I	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	G	R	G	E
Query Conservation		.	.	.																																							.	.	.				.	.	.	.	.	.
Alig confidence		.	.	.																																							.	.	.				.	.	.	.	.	.
Template Conservation
Template Sequence		Q	D	L	D	M	M	L	T	C	V	E	I	K	E	G	A	L	M	L	P	H	F	N	S	K	A	M	V	I	V	V	V	N	K	G	T	G	N	L	E	L	V	A	V	R	S	N	R	E	V	R	R	Y	T	A	R	L	K	E	G	D	V	F	I	M	P	A	A	H	P	V	A	I	N	A	S	S	E	L	H
Template Known Secondary structure					T										T	T									S	S																																		T	T							T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	S	Y	I	Y	S	K	D	C	N	R	D	V	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	G	F	G	I	N	A	E	N	N	H	R	I	F	L
Template Known Secondary structure								S		T	T						S
Template Predicted Secondary structure
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions