Job Description P75713 Confidence 99.96% Date Thu Jan 5 12:13:23 GMT 2012 Rank 8 Aligned Residues 177 % Identity 17% Template c3rnsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis Resolution 2.07 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	S	F	V	D	Y	L	V	T	L	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	E	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S	L	M	T	F	V	N	A	Q	A	E	D	S	Q	I	F	L	Y	K	R	R
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		Q	P	N	S	Y	I	S	L	F	S	L	A	K	D	E	.	.	E	I	T	A	E	A	X	L	G	N	R	Y	Y	Y	C	F	N	G	N	G	E	I	F	I	E	N	N	K	K	T	I	S	N	G	D	F	L	E	I	T	A	N	H	N	Y	S	I	E	A	R	D	N	L	K	L	I	E	I	G	E	K	I	S
Template Known Secondary structure			S	S										T	T		.	.						S		S	S									S							S	S							T	T							S	S								S	S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	P	V	E	G	Y	A	P	W	L	V	S	G	N	A	S	E	L	E	R	I	H	Y	E	G	M	D	D	V	I	L	L	D	F	L	P	K	E	L	G	F	D	M	N	M	H	I	L	S	F	A	P	G	A	S	H	G	Y	I	E	T	H	V	Q	E	H	G	A	Y	I	L	S	G	Q	G	V	Y	N	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																	.
Template Sequence		A	F	N	L	A	E	V	V	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	G	K	I	V	S	K	N	L	V	A	K	P	.	.	.	N	L	V	X	T	I	X	S	F	W	K	G	E	S	L	D	.	P	H	K	A	P	G	D	A	L	V	T	V	L	D	G	E	G	K	Y	Y	V
Template Known Secondary structure					S	G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											T	.	.	.	T										T	T					.					S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.																.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	N	W	I	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	G	R	G	E	A	F	S	Y	I	Y	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	K	P	F	I	V	K	K	G	E	S	A	V	L	P	A	N	I	P	H	A	V	E	A	E	T	E	N	F	K	X	L	L	I	L	V	K
Template Known Secondary structure		T	T							T	T							T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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