Job Description P75713 Confidence 99.66% Date Thu Jan 5 12:13:23 GMT 2012 Rank 30 Aligned Residues 200 % Identity 13% Template c3qacA_ PDB info PDB header:plant protein Chain: A: PDB Molecule:11s globulin seed storage protein; PDBTitle: structure of amaranth 11s proglobulin seed storage protein from2 amaranthus hypochondriacus l. Resolution 2.27 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.													.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	F	V	D	Y	L	V	T	L	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	E	.	.	.	.	.	.	.	.	.	.	.	.	G	K	T	F	A	L	S	E	G	G	Y	L	Y	C	P	P	G	S	L	M	T	F	V	N	A	Q	A
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		A	G	V	S	V	I	R	R	T	I	E	P	H	G	.	.	L	L	L	P	S	F	T	S	A	P	E	L	I	Y	I	E	Q	G	N	G	I	T	G	M	M	I	P	G	C	P	E	T	Y	Q	D	Q	H	Q	K	I	R	H	L	R	E	G	D	I	F	A	M	P	A	G	V	S	H	W	A	Y	N	N	G	D
Template Known Secondary structure			T										T	T		.	.								S	S																		T	T																	T	T							T	T									S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	S	Q	I	F	L	Y	K	R	R	Y	V	P	V	E	G	Y	A	P	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	P	L	V	A	V	I	L	I	D	T	A	N	H	A	N	Q	L	D	K	N	F	P	T	R	F	Y	L	A	G	K	P	Q	Q	E	H	S	N	T	G	N	I	F	R	G	F	E	T	R	L	L	A	E	S	F	G	V	S	E	E	I	A	Q	K	L	Q	A	E	Q	D	D	R	G	N	I	V	R	V	E	G
Template Known Secondary structure		S										T	T	S	T	T			S		S	S	S						S	S	S					S							G	G	G	G	S										T											T	T	T			S		S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
									146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	L	V	S	G	N	A	S	E	L	E	R	I	H	Y	E	G	M	D	D	V	I	L	L	D	F	L	P	K	E	L	G	F	.	.	.	.	D	M	N	M	H	I	L	S	F	A	P	G	A	S	H	G	Y	I	E	T	H	V	Q	E	H	G	A	Y	I	L	S	G	Q	G	V	Y	N
Query Conservation		.	.	.	.	.	.	.																																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		L	H	T	I	C	S	A	R	L	A	V	N	V	D	D	P	S	K	A	D	V	Y	T	P	E	A	G	R	L	T	T	V	N	S	F	N	L	P	I	L	R	H	L	R	L	S	A	A	K	G	V	L	Y	R	N	A	M	M	A	P	H	Y	N	L	N	A	H	N	I	M	Y	C	V	R	G	R	G	R	I	Q
Template Known Secondary structure					T	T	T	S						T	T		T	T	T		S				T	T	T								T	T	T	S	T	T					T										T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		215					.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure			.	.	.	.						.	.
Query SS confidence			.	.	.	.						.	.
Query Sequence		L	.	.	.	.	D	N	N	W	I	.	.	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	G	R	G	E	A	F	S	Y	I	Y	S	K	D	C	N	R	D	V	E
Query Conservation			.	.	.	.						.	.
Alig confidence			.	.	.	.						.	.																					.	.
Template Conservation																																		.	.
Template Sequence		I	V	N	D	Q	G	Q	S	V	F	D	E	E	L	S	R	G	Q	L	V	V	V	P	Q	N	F	A	I	V	K	Q	A	.	.	F	E	D	G	F	E	W	V	S	F	K	T	S	E	N	A	M	F
Template Known Secondary structure					T	T	S										T	T							T	T								.	.												S	S	T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions