Job Description P75713 Confidence 99.83% Date Thu Jan 5 12:13:23 GMT 2012 Rank 17 Aligned Residues 201 % Identity 12% Template c3o14B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:anti-ecfsigma factor, chrr; PDBTitle: crystal structure of an anti-ecfsigma factor, chrr (maqu_0586) from2 marinobacter aquaeolei vt8 at 1.70 a resolution Resolution 1.70 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	A	L	L	T	P	D	G	L	V	K	N	I	I	P	G	F	E	N	C	D	A	T	I	L	S	T	P	K	L	G	A	S	F	V	D	Y	L	V	T	L	H	Q	N	G	G	N	Q	Q	G	F	G	G	E	G	I	E	T	F	L	Y	V	I	S	G	N	I	T	A	K	A	E	G	K	T	F	A	L	S
Query Conservation
Alig confidence																		.																														.	.																						.	.	.	.
Template Conservation																		.																														.	.																						.	.	.	.
Template Sequence		K	P	V	V	I	D	T	D	Q	L	E	W	R	P	S	P	.	X	K	G	V	E	R	R	X	L	D	R	I	G	G	E	V	A	R	A	T	S	I	V	R	Y	A	P	G	S	.	.	R	F	S	A	H	T	H	D	G	G	E	E	F	I	V	L	D	G	V	F	Q	.	.	.	.	D	E	H	G	D	Y	P
Template Known Secondary structure		S						G	G	G	S						S	.	S	T	T										S	S	S	S											T	T		.	.								S	S													.	.	.	.		T	T
Template Predicted Secondary structure																		.																														.	.																						.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	Y	L	Y	C	P	P	G	S	L	M	T	F	V	N	A	Q	A	E	D	S	Q	I	F	L	Y	K	R	R	Y	V	P	V	E	G	Y	A	P	W	L	V	S	G	N	A	S	E	L	E	R	I	H	Y	E	G	M	D	D	V	I	L	L	D	F	L	P	K	E	L	G	F	D	M	N	M	H	I	L
Query Conservation
Alig confidence																						.	.	.																															.	.	.	.	.													.	.	.
Template Conservation																						.	.	.																															.	.	.	.	.													.	.	.
Template Sequence		A	G	T	Y	V	R	N	P	P	T	T	S	H	V	P	G	S	A	E	G	.	.	.	C	T	I	F	V	K	L	W	Q	F	D	P	A	D	R	T	Q	F	S	K	N	X	E	A	E	L	G	A	P	V	.	.	.	.	.	E	G	I	S	T	S	L	L	H	E	D	E	.	.	.	R	E	T	V	T	H	R
Template Known Secondary structure		T	T							T	T								S	S		.	.	.								S		S		T	T									T	G	G	G					B	.	.	.	.	.	T	T										S	.	.	.	S
Template Predicted Secondary structure																						.	.	.																															.	.	.	.	.													.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	A	P	G	A	S	H	G	Y	I	E	T	H	V	Q	E	H	G	A	Y	I	L	S	G	Q	G	V	Y	N	L	D	N	N	W	I	P	V	K	K	G	D	Y	I	F	M	G	A	Y	S	L	Q	A	G	Y	G	V	G	R	G	E	A	F	S	Y	I
Query Conservation
Alig confidence											.									.											.	.	.	.																								.
Template Conservation											.									.											.	.	.	.																								.
Template Sequence		K	L	E	P	G	A	N	L	T	.	S	E	A	A	G	G	I	E	.	V	L	V	L	D	G	D	V	T	V	.	.	.	.	N	D	E	V	L	G	R	N	A	W	L	R	L	P	E	G	E	A	L	S	A	T	A	.	G	A	R	G	A	K	I	W	X
Template Known Secondary structure					T	T					.				S	S				.											.	.	.	.	T	T					T	T							T	T								.
Template Predicted Secondary structure											.									.											.	.	.	.																								.
Template SS confidence
		151	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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